Pairwise Alignments

Query, 813 a.a., ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 779 a.a., ATP-dependent helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  139 bits (350), Expect = 6e-37
 Identities = 189/685 (27%), Positives = 287/685 (41%), Gaps = 107/685 (15%)

Query: 22  KNLNAEQLAAVTLPAGNALILAGAGSGKTRVLTTRIAWLLQTGQVSAGGILAVTFTNKAA 81
           + L AEQ A V    G+AL+ A  GSGKT VL   +  L++TG  +   +LA+ F   A 
Sbjct: 7   RELTAEQKAVVRHTEGHALVEAAPGSGKTTVLVAYLRRLVKTGG-NPNAMLALMFNKSAQ 65

Query: 82  KEMMTRLTAIL---PV-NVRGMWIGTFHGLCNRLLRAHWKLANLPSTFQILDTQDQLS-- 135
                RL   L   P+ +VR     T H + NR+L        LP   + L+T  + +  
Sbjct: 66  LSFEARLRRALGEGPIPDVR-----TLHSIGNRILAQLVSGGMLPR--EKLETSGKKADA 118

Query: 136 -AIKRLMKQFNVDDERFPAKQTQW-----FIAGAKEDGLRPGDIEVRSD---DDRKKVEL 186
            A + L + +          Q Q+     FI   K D   P ++   S    D R  V  
Sbjct: 119 FARRALKEAWARTGGSATPTQAQYQGFSQFITLVKSDLRPPAEVFEESGFAPDCRAFVIA 178

Query: 187 YQLYEEQCQREGVVDFGELMLRSYELLRDNAPVREHYQRRFRHILIDEFQDTNRLQYAWI 246
           +QL  +  ++  V+ + +L+ R    L  +  +   +  R+  I++DEFQD N + +  +
Sbjct: 179 FQLLLQDQEKRRVIFYDDLIYRPMVYLDAHPELWSMFANRYERIVVDEFQDINAISFFMV 238

Query: 247 KMLAGNTVGGQFEPGRDNSVIAVGDDDQSIYAFRGARVGNMT-DFVREFDVRHQIKLEQN 305
           + LAG             SV+  GD  QSIYAFRG+RV  MT  F + F    +  + + 
Sbjct: 239 QGLAGTRA----------SVMGCGDPKQSIYAFRGSRVTLMTRHFEQVFQPCTRYPMSRT 288

Query: 306 YRSYSNILDSANELISHNKKRLGKNLRTDQGPGEPVRVYESTTDLAEAQWMVEEMRQLAR 365
           +R    I   AN LI+ ++++ G  L          RV        +   +VE +     
Sbjct: 289 FRFGHEIAMMANNLITLSEEK-GLGLVVADNANPKTRVERMPLKAGKDSGVVELLAPYEH 347

Query: 366 DGFDRKEMAVLYRSNAQSRVIETALFNASVPYRVYG--GLRFF-ERAEIKHALAYLR--- 419
            G   ++ A+L R+ +     E  L  A VPY VYG  GL F  E A +  A++ +    
Sbjct: 348 AG-RLRDTAMLARNFSHLVPYEIELAEAGVPYHVYGREGLLFLPEIAALVCAVSLVAGRW 406

Query: 420 LLENKDDDTSFLRVVNFPPRGIGARTLETLQDAARAAGRSLHDAVSVVGGKAGANLTGFV 479
           ++E +D       ++  P   I   T E L++ A        D    + G     L G +
Sbjct: 407 IIEPEDRVHFIFSLLTTPSPFI---TYEILREVA-------EDMEPYLEGAGRRELPGML 456

Query: 480 AKIDVLREQTQGVSLREIIELVLDHSGLVEHYKADREGADRIENLDELVNAAESFVTQEG 539
           AKI          S+R                    + A   +NLDE V+A    V    
Sbjct: 457 AKI--------AASIRS-------------------KNARGAQNLDERVDALRLLV---- 485

Query: 540 FGRDAVALPVDELRQSPASQGIDLTRPVIDEPLAPDAETGETLSPLAAFLTHA------- 592
            G      P   + +  A       R VI+       +  E+L  L AF+  A       
Sbjct: 486 -GGTLAQAPAATIVR--AYMAHTRMRDVIERAAPTPEQAAESLGNLDAFVKLAERAGSID 542

Query: 593 ---------ALESGDNQAQAGQDAVQLMTVHAAKGLEFDCVFITGMEEGLFPHENSMSDF 643
                    A   GD +  AG D V L T+H +KGLE+  V + G+  G+FP  +++ D 
Sbjct: 543 EFLEVLGPMAALKGD-EPPAG-DHVMLTTLHRSKGLEWSLVMMVGLTRGVFP--SALPD- 597

Query: 644 ESLEEERRLMYVAITRARKRLYLSH 668
           + ++EERRL +V ITRA  RL L H
Sbjct: 598 KDVDEERRLCFVGITRAMDRLVLFH 622