Pairwise Alignments

Query, 529 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  179 bits (454), Expect = 2e-49
 Identities = 154/519 (29%), Positives = 219/519 (42%), Gaps = 29/519 (5%)

Query: 17  AMLLRQADVFGARALLRIGAHAWTHRDAAQAAAVRAGALAAAGVARGDRIAVMCGNRIEF 76
           + L R A V+  R  +  GA  +++R   + +   A AL   GV  G+R+A++  N  E 
Sbjct: 24  SFLKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASALERVGVQPGERVAILAPNIPEM 83

Query: 77  LESFLGAGWLGASTVPVNTASMGPQVEYFLANSQAKLLVIEAAFVERLATADLARTSLRE 136
           LE+  G    GA  V +N    G  + + L +  AK+L+ +  F   +A   LA      
Sbjct: 84  LEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREF-GAVANQALAMLDAPP 142

Query: 137 IWV-VGGSEAVEWQVPAGVRVVPYPEAGDALEP--APVQPGDPLAILYTSGTTGPAKGVI 193
           + V +   +A    +   +    +   GD   P  AP      +AI YTSGTTG  KGV+
Sbjct: 143 LLVGIDDDQAERADLAHDLDYEAFLAQGDPARPLSAPQNEWQSIAINYTSGTTGDPKGVV 202

Query: 194 CPHAQYFWWGVNSAEVLGVGADDVLCTTLPLFHINALNTFAQAALTGAEVVFESRFSASG 253
             H   +      A +  +G   V   TLP+FH N  +      L+G   V   +     
Sbjct: 203 LHHRGAYLNACAGALIFQLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDA 262

Query: 254 FWPAMRASRATVVYLLGAMVPILLAQPEGAGEREHRVRIGLGPGVPSAAGATFKARTGVS 313
              A+     T +     ++ +L+     +        I  G   PSA  A  +AR G +
Sbjct: 263 INAAIAEHAVTHLSAAPVVMSMLIHAEHASAPPVPVSVITGGAAPPSAVIAAMEAR-GFN 321

Query: 314 LLEGYGSTET---------NFAIATAPDSPRGGVMGWLRPGF------QARVADEDDVAL 358
           +   YG TE+            +   P   R   M   R G       +A V D D    
Sbjct: 322 ITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMS--RQGVAHPLLEEATVLDTDTGRP 379

Query: 359 PPGEA---GELLLRADEPYAFASGYFNMPEKTVEAWRNLWFHTGDRVVRDADGAFRFVDR 415
            P +    GEL++R +       GY + PE T  A  N W HTGD  V   DG     DR
Sbjct: 380 VPADGLTLGELVVRGN---TVMKGYLHNPEATRAALANGWLHTGDLAVLHLDGYVEIKDR 436

Query: 416 IKDAIRRRGENISSFEVEQVLLSHPGVAACAVYPVRSELAEDEVMAALVAREGVPVDPAE 475
            KD I   GENISS E+E+VL  HP V   AV         +   A +  R        +
Sbjct: 437 AKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWGETPHAFVTLRADALASGDD 496

Query: 476 LARFCEGRLPYFAVPRYIDVLADLPRTENGKVQKFKLRE 514
           L R+C  RL +F  PR++  L DLP+T  GK+QKF LRE
Sbjct: 497 LVRWCRERLAHFKAPRHVS-LVDLPKTATGKIQKFVLRE 534