Pairwise Alignments

Query, 351 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 59/334 (17%)

Query: 10  LTDGLANGAVYLLAGLGLVLIFSVTRVVFVPFGDIAAFAALSLAAFETDRVPPTIGMVAV 69
           L +GL  G+VY L  +G  +++ +  ++    G++   +A                    
Sbjct: 9   LVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAY------------------- 49

Query: 70  LAALALATEVGSLLRRGEAKRIPKAVLMWGVLPAIPCVLAWLAARPGVPVAVHIAVAVLL 129
           LAA++LA     LL     +  P  +LM G L                         +++
Sbjct: 50  LAAISLA-----LLAYFGVESFP--LLMLGTL----------------------LFTIVV 80

Query: 130 VVPIAPLLARVVFQPIADASVLVLLIVSLALHFLLSGLGLLFFGPEGSRTTPLTSAVFTL 189
                  + R+ ++P+ +++ L  LI ++ +  +L     +  G        L      +
Sbjct: 81  TGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQGARQQGVPTLLEGAMRV 140

Query: 190 SDGFTVSGQV------VLMVGAAIVLSGLFFLVFERTVAGKALRATAVNRVGARLVGIRP 243
             G   SG V      + ++ AA V  GL   V + T  G+  RAT  +R  A ++GI  
Sbjct: 141 EVG---SGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMCRATQQDRKMASILGINT 197

Query: 244 VRTALLAYGCASLLAGLIGVLIAP-VTTMYYDSGFIIGLKAFVAAIIGGLVSYPMTAVGA 302
            R     +   +++A L GVLI     T  + +GFIIG+KAF AA++GG+ S P   +G 
Sbjct: 198 DRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTAAVLGGIGSLPGAMLGG 257

Query: 303 LAVGVVES-FASFWSGALKDVIVFSLLIPVLMLR 335
           + +G+ ES F+   +   KDV  FSLL+ +L+ R
Sbjct: 258 IILGISESLFSGLINSDYKDVFSFSLLVMILIFR 291