Pairwise Alignments

Query, 351 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 288 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 94/337 (27%), Positives = 147/337 (43%), Gaps = 60/337 (17%)

Query: 1   MTWDVALILLTDGLANGAVYLLAGLGLVLIFSVTRVVFVPFGDIAAFAALSLAAFETDRV 60
           M+ D+A  +LT GL  G VY L  LGL +IF V RVV    G++ A              
Sbjct: 1   MSIDLANQILT-GLLTGLVYSLMALGLSVIFGVVRVVNFAHGEMTA-------------- 45

Query: 61  PPTIGMVAVLAALALATEVGSLLRRGEAKRIPKAVLMWGVLPAIPCVLAWLAARPGVPVA 120
                 +A+ AA AL                                  WL   P     
Sbjct: 46  ------LAMYAAWALFN--------------------------------WLELDP----L 63

Query: 121 VHIAVAVLLVVPIAPLLARVVFQPIADASVLVLLIVSLALHFLLSGLGLLFFGPEGSRTT 180
           V + +  LL+  +  L+ R +          +  I+ +A+  ++    LL FGP+ +   
Sbjct: 64  VGLPLIALLLFALGYLMQRGLIDAFVSKPEHMQFILLVAVAIIMVNGSLLVFGPD-AHGI 122

Query: 181 PLTSAVFTLSDGFTVSGQVVLMVG-AAIVLSGLFFLVFERTVAGKALRATAVNRVGARLV 239
            +     T   G  +  +V L+   AA+ +SGL  L F  T+ GKA+RA A N VGAR++
Sbjct: 123 QVPYGFDTYEVGPLLIDKVRLLAAVAALGISGLLMLFFRHTMTGKAIRACADNLVGARVI 182

Query: 240 GIRPVRTALLAYGCASLLAGLIGVLIAPVTTMYYDSGFIIGLKAFVAAIIGGLVSYPMTA 299
           G+   +   + +G  S   G  G L+A +  +   SG  + + AF+  I+GGL S     
Sbjct: 183 GLNVKQLYAVTFGIGSACVGAAGALLALLIDVMPSSGPELTMLAFIIVIVGGLGSMGGAL 242

Query: 300 VGALAVGVVESFAS-FWSGALKDVIVFSLLIPVLMLR 335
           +G + +GV E  A  F   ++K +  F++LI +L+LR
Sbjct: 243 LGGILIGVSEVLAGYFLMPSMKAMFSFAILILILVLR 279