Pairwise Alignments

Query, 387 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 376 a.a., Leu/Ile/Val/Thr-binding protein from Xanthobacter sp. DMC5

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 106/392 (27%), Positives = 166/392 (42%), Gaps = 35/392 (8%)

Query: 8   LTRGTLAAVLTACGVASALAADLKVGLSVSLSGPNSSL-GVPYAKGMQAALAY---KGEV 63
           LTR  +AA   +   A A AAD+K+G+  S SG +++L G     G + A A     G++
Sbjct: 6   LTRLLIAATAVSLASAPAFAADVKLGIVQSTSGGSAALYGTMQKNGAELAAAEINASGKL 65

Query: 64  NGRKVQLIVLDDGSDPTTAGRNARKLIEDEKVDVLMGTSGVPAAIAMAQVGKEAKTPMIG 123
              K+  +  DD  D        ++LI  +KV V+ G +   +A A   +   AK P+I 
Sbjct: 66  GDLKLVPVHQDDAGDRGQTVNIFQRLINQDKVTVIFGPTLTTSAFAADPIANAAKVPVIA 125

Query: 124 LTPILLD-PNENPWVMTVAQPTQLMIDAVVE-RMKRNNVKTVGYI-GFSDAWGDLVYDAL 180
            +      P    ++   + P   +   V+   +KR   KT   I G  D      Y   
Sbjct: 126 SSNTAPGVPAIGEYIFRTSAPEAAVFPGVLAYAVKRYQPKTAAQIYGIDDVLMKAAYGVH 185

Query: 181 MKAAPGAGIKVVSNERYARADASVTGQVLKIVALRPDAVMTGGAGTPGALPFLALQERGY 240
             A   AGIKVV+ E + + D   + Q+ KI A  PD ++ GG     A      ++ G 
Sbjct: 186 KAALDKAGIKVVATETFQKGDVDYSAQLTKIKAANPDIIVVGGLAEETANIVRQARQLGI 245

Query: 241 KGGV--YGQHGLINPDFVRVVGAAGQNALMPTGPVIVAEQLPDNYPTKKIATDFRAVFQK 298
                  G +  I+     + G A Q  L+ +G  I       ++ T        A   K
Sbjct: 246 PQSTVFLGANAAISTKLNDLAGPAAQGFLVGSGWFI-------DFDTPANKAFVEAYKAK 298

Query: 299 VNNAPTSDAFSAYSFDGWLVFADAASRAMKKAEPGTPEFRVALRDAIFSTKEVVGTHGVY 358
             NAP  D F+A +     +FADA  RA   ++P        LR AI  TK++    G +
Sbjct: 299 YGNAP--DTFAAQAHAAVTIFADAVKRAGGVSDP------AKLRAAIAETKDLDTVLGPF 350

Query: 359 TFKPGSLYGVDERARVIV----KLDNGQWKLA 386
           +F         +R  V+V    +L +G+++LA
Sbjct: 351 SFD-------KDREPVLVAKVLELKDGKFQLA 375