Pairwise Alignments

Query, 387 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 390 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 84/351 (23%), Positives = 150/351 (42%), Gaps = 16/351 (4%)

Query: 2   KSLMQTLTRGTLAAVLTACGVASALAADLKVGLSVSLSGPNSSLGVPYAKGMQAALAYKG 61
           + L+QT     L+A+  +  +ASA     K+GL + ++G ++S G       +  +A  G
Sbjct: 4   RHLIQT---AALSALALSMSLASAQDNKFKIGLILPMTGQSASTGRQIEAAARLYMAQNG 60

Query: 62  E-VNGRKVQLIVLDDGSDPTTAGRNARKLIEDEKVDVLMGTSGVPAAIAMAQVGKEAKTP 120
           + V G+KV+LIV DD   P    R A++L+ ++KV+VL G    P A+A+A +  ++KTP
Sbjct: 61  DTVAGKKVELIVKDDTGLPDVTKRLAQELVVNDKVNVLAGFGLTPLALAVAPIATQSKTP 120

Query: 121 MIGLTPILLDPNE-NPWVMTVAQPTQLMIDAVVERMKRNNVKTVGYIGFSDAWGDLVYDA 179
            + +        E +P+++  +     +  A+ +   +N VKTV  +      G+     
Sbjct: 121 EVVMAAATSSITEASPYIIRSSFTLPQVSVAMGDWAPKNGVKTVVTLVADYGPGNDAEKF 180

Query: 180 LMKAAPGAGIKVVSNERYARADASVTGQVLKIVALRPDAVMTGGAGTPGALPFLALQERG 239
             +     G KV+   R    +      + K+   +PDA+        GA       ERG
Sbjct: 181 FSERFVLNGGKVIEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAGAAVMKQFLERG 240

Query: 240 Y-KGGV-YGQHGLINPDFVRVVGAAGQNALMPTGPVIVAEQLPDNYPTKKIATDFRAVFQ 297
             K G+     G +  D    +   G  AL     V+ +      +P+  +   F   F+
Sbjct: 241 MDKAGIKMIATGDVTDD--DQLNDMGDGAL----GVVTSHHYSAAHPS-AMNKKFVEAFE 293

Query: 298 KVNNAPTSDAFSAYSFDGWLVFADAASRAMKKAEPGTPEFRVALRDAIFST 348
           K N     +  +   +DG  V  +A      K + G      A++  +F +
Sbjct: 294 KANPKMRPNFMAVGGYDGMRVIYEALKTT--KGQGGGEALLAAMKGQVFES 342