Pairwise Alignments

Query, 387 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 84.0 bits (206), Expect = 7e-21
 Identities = 76/265 (28%), Positives = 122/265 (46%), Gaps = 16/265 (6%)

Query: 10  RGTLA-AVLTACGVASALAADLKVGLSVSLSGPNSSLGVPYAKGMQAA---LAYKGEVNG 65
           +G LA AV TA GV+S + AD+K+G++  ++G N++ G  Y KG QAA   +   G VNG
Sbjct: 8   KGFLALAVATALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNG 67

Query: 66  RKVQLIVLDDGSDPTTAGRNARKLIEDEKVDVLMG----TSGVPAAIAMAQVGKEAKTPM 121
            K+ L+  DD  +P  A   A +L++ +KV  ++G    ++ +PA+    + G  A TP 
Sbjct: 68  EKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITPG 127

Query: 122 IGLTPILLDPNENPWVMTVAQPTQLMI---DAVVERMKRNNVKTVGYIGFSDAWGDLVYD 178
               P + +   +       +  Q  I   D +V+ +K    K V  +   D +G  + D
Sbjct: 128 -STNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKG---KKVAVLHDKDTYGQGLAD 183

Query: 179 ALMKAAPGAGIKVVSNERYARADASVTGQVLKIVALRPDAVMTGGAGTPGALPFLALQER 238
           A        G+K V  E   R +   +  V KI +   D V  GG           L+E+
Sbjct: 184 ATKAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQ 243

Query: 239 GYKGGVY-GQHGLINPDFVRVVGAA 262
           G K   +    G++  + V   G A
Sbjct: 244 GLKDVKFMSDDGIVTDELVSTAGGA 268