Pairwise Alignments

Query, 381 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 80.1 bits (196), Expect = 9e-20
 Identities = 97/335 (28%), Positives = 143/335 (42%), Gaps = 32/335 (9%)

Query: 11  ATALALTAAQAMAADLKIGFISSLSGPVAALGIPYEKGIRAA---IAEHPEIAGRKVQLI 67
           A A AL  +  + AD+KIG    ++G  AA G  Y KG +AA   I     + G K+ L+
Sbjct: 14  AVATALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNGEKIVLV 73

Query: 68  VLDDASDPTTAGRNARKLVTEDKVDVLIGTSGVPGAMAIAAVAKELNTPLISP----TPV 123
             DDA +P  A   A +LV +DKV  ++G       +  + V  E     I+P      V
Sbjct: 74  KGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITPGSTNPQV 133

Query: 124 TIAGPEGAWTVTVSQPFPLMVAG--VVDRMKKSGVKTVAFIGFSDALGDLAYDSLMKSAD 181
           T  G    + +        +VAG  +VD +K    K VA +   D  G    D+     +
Sbjct: 134 TERGLSAMFRMCGRDDQQGIVAGDYIVDVLKG---KKVAVLHDKDTYGQGLADATKAQLE 190

Query: 182 AAGIKVVANERYARSDSSVAGQVLKIVAARPDAVFAGNSGTPGALPYI-ALADRGYKG-K 239
             G+K V  E   R +   +  V KI +   D V+ G    P A P +  L ++G K  K
Sbjct: 191 KRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGL-HPEAGPLVRQLREQGLKDVK 249

Query: 240 IYGTHGLINADFVRVGGAS--IEGLQVPSGPVLVADQ--LPDSNPIKKVSMGFRSAYQKV 295
                G++  + V   G +  ++G+ +  G    AD   LPDS   K V   FR A    
Sbjct: 250 FMSDDGIVTDELVSTAGGAQYVDGVYMTFG----ADPRLLPDS---KAVVEEFRKA---- 298

Query: 296 NGAVPTDAFSSYTYDAYLLLADAASRTKGEPGTPA 330
            G  P + ++ Y Y +   LA A +  K   G  A
Sbjct: 299 -GTEP-EGYTLYAYASLQALAAAFNGAKSNKGEDA 331