Pairwise Alignments

Query, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 3e-39
 Identities = 150/561 (26%), Positives = 229/561 (40%), Gaps = 69/561 (12%)

Query: 5   TVHQVFAATAARTPQAEFLFTESVTAAAYGIEAGAIRWGDAAGRIERLRAAYAQAGYGHG 64
           T+ Q F AT AR   +E L +          +     W   A ++E    A    G   G
Sbjct: 19  TIGQAFDATVARCCDSEALVSRH--------QGLRYSWRQLAEQVEIYARALIALGVNTG 70

Query: 65  HRVGLLLENRPAFIFHWLALNALGVSVVPINAEMRSAELVYLIGHSEIGLAVT------- 117
            RVG+   N   +    LA   +G  +V IN   R  EL Y++  S     V        
Sbjct: 71  DRVGIWSPNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFKTS 130

Query: 118 -----LQERAADLRAAAAQA----------GIEFETMGPDDAVPPARTPAPRA------- 155
                +QE   +L +AA             G+      P     P    A RA       
Sbjct: 131 DYHTMVQELVPELASAAPGELASECLPELRGVISLAANPPAGFLPWHAFAERAGQTSVEA 190

Query: 156 ----HEPVGTDTECGLLYTSGTTGRPKGCILSNAYFLRAGEWYAALDGVCSIRPDKERVI 211
                + +  D    + YTSGTTG PKG  LS+   L  G       G+ +    ++R++
Sbjct: 191 CTARQQSLQFDQPVNIQYTSGTTGAPKGATLSHYNILNNGFMVGESLGLTA----RDRMV 246

Query: 212 TPLPLNHMNAMAFSTMVVLVAGGCLVQL-DRFHPKTWLASAKESGATIVHYLGVMPAMLL 270
            P+PL H   M  + +  +  G  ++   D F  +  L +  E  ATI++ +  M   +L
Sbjct: 247 IPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGVPTMFIAML 306

Query: 271 SAPASAADRDHAIRWGFGAGVDRKNHAPFE------ERFGFPLVE-AWAMTETGAAACIM 323
             P+ A      +R G  AG       P E      ++     V+ A+ MTET   +   
Sbjct: 307 DHPSRAHMDLSTLRSGIMAGAT----CPIEVMRRVIDQMHMAEVQIAYGMTETSPVSLQT 362

Query: 324 ANREPRLVGTSCFGRQEDFVEIRLVGEDGGDAAVDAPGELLVRSAGSDPRRYFFSGYLKD 383
              +   +  +  GR +  +E +LV  DG        GEL  R            GY  +
Sbjct: 363 GPDDDLELRVTTVGRTQPQLENKLVDADGCIVPRGEIGELCTRGYS------VMLGYWDN 416

Query: 384 EEATREAWAD-GWFHTGDLVRRDAQGNFFFVDRKKNVIRRSGENISAVEVESVLNQHPAV 442
            +AT +A    GW H+GDL   D QG    V R K++I R GENI   E+E     HPAV
Sbjct: 417 PQATADAIDPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAV 476

Query: 443 KASAVAATPDAVRGDEVLACVVMREDAGAVHPEQIAASIVQHALAQLAYYKAPGYVAFVD 502
             + V   P +  G+E++A + +     A   E     +     A++A++K P Y+ FVD
Sbjct: 477 ADAQVIGIPCSRYGEEIVAWIKLHPGHSATVEE-----LQGWCKARIAHFKVPRYIRFVD 531

Query: 503 ALPLTPSQKIQRGQLREMARA 523
             P+T + K+Q+ ++RE++ A
Sbjct: 532 EYPMTVTGKVQKFRMREISVA 552