Pairwise Alignments

Query, 542 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  138 bits (347), Expect = 6e-37
 Identities = 148/542 (27%), Positives = 219/542 (40%), Gaps = 74/542 (13%)

Query: 29  TAAAYG----IEAGAIR--WGDAAGRIERLRAAYAQAGYGHGHRVGLLLENRPAFIFHWL 82
           TAA YG    +  GAIR  W +   R  RL +A A  G G G  V ++L N P  +    
Sbjct: 27  TAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPTMLEAHF 86

Query: 83  ALNALGVSVVPINAEMRSAELVYLIGHSEIGLAVTLQERAADLRAAAAQAGIEFETMGPD 142
            +   G  +  +N  + +  + +++ H E  + +T +E  A +  A A        +  D
Sbjct: 87  GVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEHPPLVVDVD 146

Query: 143 DA-VPPARTPAPRAHEPVGTDTE--------------CGLLYTSGTTGRPKGCILSNAYF 187
           D      R  +   +E +  + +                L YTSGTTG PKG +     +
Sbjct: 147 DPEYGEGRAVSQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVV-----Y 201

Query: 188 LRAGEWYAALDGVCSIRPDKERV-ITPLPLNHMNAMAFSTMVVLVAGGCLVQLDRFHPKT 246
              G +  AL    +       V +  LP+ H N   +   +  +AG   V L R  P+ 
Sbjct: 202 HHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCNGWCYPWTITALAG-THVFLRRVDPQK 260

Query: 247 WLASAKESGATIVHYLG---VMPAMLLSAPASAADRDHAIRWGFGAGVDRKNHAPFEERF 303
            L   +E    + H  G   V+ A++    A+ A  +H ++                E+ 
Sbjct: 261 ILTLIREH--KVSHLCGAPIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEQM 318

Query: 304 GFPLVEAWAMTETGAAACIMA---------------------NREPRLVGTSCFGRQEDF 342
           G  +   + +TE      + A                      R P L G      Q   
Sbjct: 319 GIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQT-- 376

Query: 343 VEIRLVGEDGGDAAVDAPGELLVRSAGSDPRRYFFSGYLKDEEATREAWADGWFHTGDLV 402
             ++ V  DG     D  GE+ +R            GYLK+ EAT EA+  GWFHTGDL 
Sbjct: 377 --LQPVPRDG-----DTLGEIFMRG------NTVMKGYLKNPEATAEAFRGGWFHTGDLA 423

Query: 403 RRDAQGNFFFVDRKKNVIRRSGENISAVEVESVLNQHPAVKASAVAATPDAVRGDEVLAC 462
              A G     DR K++I   GENIS +EVE  L +H AV  +AV A PD   G+   A 
Sbjct: 424 VWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWGETPCAF 483

Query: 463 VVMREDAGAVHPEQIAASIVQHALAQLAYYKAPGYVAFVDALPLTPSQKIQRGQLREMAR 522
           V ++          I +   +H    LA +K P  V F + LP T + KIQ+  LR+ A+
Sbjct: 484 VALKPGREDTREADITSWCREH----LAGFKVPKTVVFGE-LPKTSTGKIQKYVLRDRAK 538

Query: 523 AL 524
           AL
Sbjct: 539 AL 540