Pairwise Alignments

Query, 363 a.a., putative membrane protein from Variovorax sp. SCN45

Subject, 355 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  226 bits (575), Expect = 9e-64
 Identities = 139/342 (40%), Positives = 198/342 (57%), Gaps = 14/342 (4%)

Query: 24  RGVMIASYLLMLGALLLVMWEHLLPGLLCVCIGFLATRWFARVLTGGLQRIPPLGRRPER 83
           R + +AS ++++  LLL +   LLP LL   + F        +LT  LQ +   G+R   
Sbjct: 26  RQITLASLIIVMAGLLLALPLKLLPSLLAGLLVFE----LVNMLTPRLQPLLA-GQR--- 77

Query: 84  AIGWANVLAVILVLVGPIALLTVLLSQAREYIVDAPDQYRELLDYTARTVLELRSKLPGE 143
               A  LAV L+    ++ LT+L++ A  +++   +     LD     V   RS+LP  
Sbjct: 78  ----ARWLAVALLGTLVVSTLTLLIAGAFSFLLHEAENPGASLDKFMALVERARSQLPPF 133

Query: 144 IAAYLPEGAAEIQRVIANYLRAQAGSLAMAGRAWLHGLLFSYVGLIVGALAAVAHAP--L 201
           I  YLP  AAE +  I +++++    L + G+   H  +   +G+I+GA+ A+   P   
Sbjct: 134 IEGYLPASAAEFKVAIGDWIKSHLSDLQLVGKGMAHMFVTMLIGMILGAIIALQRIPDIS 193

Query: 202 RRLPLADQLHQRVQTFGEAFGQIVAAQFWIAAFNTLLTAIFLLFVMPLWGAHLPYTPALI 261
           RR PLA  L +R+    +AF  IV AQ  I+  NT+ T IFL  VMPL+  HLP T  LI
Sbjct: 194 RRKPLAAALFERLSLLVKAFRNIVFAQIKISLLNTIFTGIFLAVVMPLFDVHLPLTKTLI 253

Query: 262 TLTFLAGLVPIVGNLVCNSVITLVGLSVSPVTAAACLIFLIVIHKAEYVINAKVVGARTQ 321
            LTFL GL+P++GNL+ N++IT+VGLS+S   AAA L +L+VIHK EY +NA++VG +  
Sbjct: 254 VLTFLLGLLPVIGNLMSNTLITIVGLSLSIWVAAAALGYLVVIHKIEYFLNARIVGGQIS 313

Query: 322 MSVWELLAVMFVAEAVFGPAGLVAAPLYYAYLKKELQAAALV 363
              WELL  M V EA FG  G+VA P+YYAYLK EL+ A LV
Sbjct: 314 AKAWELLLAMLVFEAAFGLPGVVAGPIYYAYLKSELKRAELV 355