Pairwise Alignments

Query, 430 a.a., RNA polymerase ECF-type sigma factor from Variovorax sp. SCN45

Subject, 184 a.a., RNA polymerase sigma factor, sigma-70 family from Enterobacter asburiae PDN3

 Score = 47.4 bits (111), Expect = 4e-10
 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 18/174 (10%)

Query: 12  RRTVEAVWRMESAKIIATVARMVRDVGLAEELAQDALVSALEQWPDA----GVPDNPAAW 67
           RR  E ++R+ S  + A   RM+     AEE+  D  V+    W  A        +P  W
Sbjct: 21  RRAFEQLYRLTSPHLFAVALRMLHHRAWAEEILHDCFVTV---WSKAETYNAALSSPMTW 77

Query: 68  LTAVAKRRALDRLRHLQLAEHKAGEIGRELDARHEMAQADFADAVDAALDDDIGDDLLRL 127
           LT + + R +D LR            G+   A  E + ++ +   +    ++  DD    
Sbjct: 78  LTHIVRNRCIDWLRS-----------GQTRAAAREESYSEESLLSENDEQNNWHDDAQAA 126

Query: 128 VFTACHPVLSTEARVALTLRVMGGLTTDEIARAFLVPEATVAQRIVRAKRTLAE 181
               C   LS E R ++TL    G++  +IA     P  +V   I RA   L E
Sbjct: 127 RLRHCLDHLSHEQRQSITLAYYQGMSHSDIADWLQQPVGSVKSWIRRAMDHLRE 180