Pairwise Alignments

Query, 242 a.a., Undecaprenyl diphosphate synthase (EC 2.5.1.31) from Variovorax sp. SCN45

Subject, 251 a.a., Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) from Pseudomonas putida KT2440

 Score =  250 bits (638), Expect = 2e-71
 Identities = 123/234 (52%), Positives = 155/234 (66%), Gaps = 7/234 (2%)

Query: 8   VPHHVAIVMDGNGRWATRRFLPRVAGHKQGVESLRRCVKACADRGVGVLTVFAFSSENWN 67
           VP HVAI+MDGN RWA +R LP VAGHK GV+++R  ++ CA  GV VLT+FAFSSENW 
Sbjct: 12  VPRHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAKSGVEVLTLFAFSSENWQ 71

Query: 68  RPVEEVSGLMELMVGALAREVPRLSSDGVRLYFVGERGGLSPKMVKGLVDAEAATAHNER 127
           RP EEV  LMEL   AL RE  RL  + + L  +G+R    P++   + +AEA TA N R
Sbjct: 72  RPAEEVGALMELFFSALRREAKRLDENNISLRIIGDRSRFHPELQAAMREAEAVTAGNNR 131

Query: 128 MVLNVCFNYGGRWDVAQAAAKLV-------ARGEAVTEASLDRAMSLAHVPDPDLFIRTG 180
            +L +  NYGG+WD+AQAA +L         R E +T   L   ++   +P PDL IRTG
Sbjct: 132 FILQIAANYGGQWDIAQAAQRLAREVQAGHLRPEDITPGLLQTCLATGDLPLPDLCIRTG 191

Query: 181 GEQRLSNFLLWQSAYAELFFSDKLWPEFDEAALDEAIAAFQGRERRFGQTSAQV 234
           GE R+SNFLLWQ AYAEL+FSD  WP+F   A+  A+A F  R+RRFG+TS QV
Sbjct: 192 GEHRISNFLLWQLAYAELYFSDLYWPDFKHEAMRNALADFASRQRRFGKTSEQV 245