Pairwise Alignments

Query, 281 a.a., Tryptophan synthase alpha chain (EC 4.2.1.20) from Variovorax sp. SCN45

Subject, 268 a.a., tryptophan synthase subunit alpha (NCBI) from Escherichia coli BW25113

 Score =  149 bits (376), Expect = 6e-41
 Identities = 91/269 (33%), Positives = 142/269 (52%), Gaps = 7/269 (2%)

Query: 1   MSRIAATFDALKKDGRRALVPYVTAGFPFADITPELMHGMVEAGADVIELGVPFSDPMAD 60
           M R  + F  LK+    A VP+VT G P  + + +++  ++EAGAD +ELG+PFSDP+AD
Sbjct: 1   MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLAD 60

Query: 61  GPVIQKAGEAALALGIGMKQVLAIVAAFRQKNATTPVVLMGYANPVERYDLVHGKQAFIR 120
           GP IQ A   A A G+   Q   ++A  RQK+ T P+ L+ YAN V       G   F  
Sbjct: 61  GPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMYANLV----FNKGIDEFYA 116

Query: 121 DAAAAGVDGLLVVDYPPEECEAFAADLKAAGIDLIFLLAPTSTDERMAQVARIASGYVYY 180
                GVD +LV D P EE   F        +  IF+  P + D+ + Q+A    GY Y 
Sbjct: 117 QCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYL 176

Query: 181 VSLKGVTGAGHLDAEAVGQMIPRIRQHVGIPVGVGFGI-RDARTAQAVGSAADAVIIGTK 239
           +S  GVTGA +  A  +  ++ +++++   P   GFGI    +   A+ + A   I G+ 
Sbjct: 177 LSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSA 236

Query: 240 IIQLIED--QPRDKVVPAVREFLAGIREA 266
           I+++IE      +K++ A++ F+  ++ A
Sbjct: 237 IVKIIEQHINEPEKMLAALKVFVQPMKAA 265