Pairwise Alignments

Query, 515 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Variovorax sp. SCN45

Subject, 500 a.a., Lysine--tRNA ligase from Pseudomonas putida KT2440

 Score =  558 bits (1438), Expect = e-163
 Identities = 298/515 (57%), Positives = 360/515 (69%), Gaps = 15/515 (2%)

Query: 1   MSDQKTPTPPTPAVDENQLIAERREKLKLLRTAQVEGKGVAFPNDFKPGHRAAALVEAHG 60
           MSD KT +      +EN LIA R+EKL     A    KG AFPNDF+       L + + 
Sbjct: 1   MSDLKTESQDLQQ-EENALIALRKEKL-----AAERAKGNAFPNDFRRDSYCNDLQKQYA 54

Query: 61  ATEAEALEAQAVAVSVAGRMMLKRVMGKASFATLQDATSRIQLYVTRDAVGEEAYAEFKR 120
               E LEA A+ V VAGR+ML R     SF  +QD T RIQ+YV R  + EE  A  K 
Sbjct: 55  DKTKEELEAAAIPVKVAGRIMLNR----GSFMVIQDMTGRIQVYVNRKTLPEETLAAVKT 110

Query: 121 WDLGDIVGAEGTLMKTKTGELSIKVTQLRLLTKSLRPLPDKFHGMADQEQKYRQRYVDLI 180
           WDLGDI+ AEGTL ++  G+L +++T +RLLTKSLRPLPDK HG+ D EQ+YRQRYVDL+
Sbjct: 111 WDLGDIISAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLM 170

Query: 181 TDESARVRFTARSKAVSALREFMVANDFLEVETPMLHPIPGGANAKPFKTHHNALDQEMF 240
            +E  R  F  RS+ +S +R+F++  DFLEVETPML  IPGGA AKPF+THHNALD  MF
Sbjct: 171 VNEETRHTFRVRSQVISHIRKFLIERDFLEVETPMLQTIPGGAAAKPFETHHNALDMAMF 230

Query: 241 LRIAPELYLKRLIVGGFERVFEINRSYRNEGISVRHNPEFTMMEFYAAYWNYRDLMDFTE 300
           LRIAPELYLKRL+VGGFE+VFEINR++RNEG+S RHNPEFTM+EFY AY +YRD MD TE
Sbjct: 231 LRIAPELYLKRLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTE 290

Query: 301 TLIRTIADKAVGTQQLTYGGKPVDLTQPFERLTIREAILKYTDAEGVAQGVDDTAWLIAA 360
            L R +A   +G+  + YG K     +PF RL++ ++ILKY + E  A  + D    +  
Sbjct: 291 ELFRELAQLVLGSTDVPYGDKVFHFGEPFVRLSVFDSILKY-NPELTAADLQD----VDR 345

Query: 361 LRKIGLSEEKDKLSQRSLASLQVMYFEETVEEKLWQPTFIMEHPTEISPLARANDERPEV 420
            R+I        L    L  LQVM FEE VE KL QP FI E+P E+SPLAR ND+ P V
Sbjct: 346 AREIARKAGAKVLGHEGLGKLQVMIFEELVEHKLEQPHFITEYPFEVSPLARRNDDNPAV 405

Query: 421 TERFELYITGREFGNGFSELNDAEDQAARFNAQVAAKDGGDDEAMYYDHDFVRALEYGMP 480
           T+RFEL+I GRE  N +SELNDAEDQA RF AQVA KD GDDEAM+YD DFVRALEYGMP
Sbjct: 406 TDRFELFIGGREIANAYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMP 465

Query: 481 PTGGCGIGIDRLMMLLTDSPSIRDVILFPALRRES 515
           PT G GIGIDRL+MLLT+SPSIRDVILFP +R ++
Sbjct: 466 PTAGEGIGIDRLVMLLTNSPSIRDVILFPHMRPQA 500