Pairwise Alignments

Query, 1068 a.a., Ribonuclease E (EC 3.1.26.12) from Variovorax sp. SCN45

Subject, 485 a.a., ribonuclease G from Pseudomonas simiae WCS417

 Score =  278 bits (710), Expect = 9e-79
 Identities = 167/465 (35%), Positives = 260/465 (55%), Gaps = 12/465 (2%)

Query: 2   KRMLINATQAEERRLAIVDGQKLLDYEIEIEGREQRKGNIYKAVVTRVEPSLEACFVDYG 61
           + +LIN T  E R +A+V+   L +  +E   +    GNIYK  V RV P ++A FVD G
Sbjct: 3   EEILINITPMESR-VAVVENGVLQEVHVERTQKRGIVGNIYKGKVVRVLPGMQAAFVDIG 61

Query: 62  EDRHGFLPFKEISKQYFAEGVSASQARIQDAIREGQELTVQVEKEERGNKGAALTTFISL 121
            DR  F+   EIS +   EG +     I   + EGQ L VQV K+  G+KGA LTT +S+
Sbjct: 62  LDRAAFIHASEISLR---EGPAVES--ISALVHEGQSLVVQVTKDPIGSKGARLTTQLSI 116

Query: 122 AGRYVVLMPNNPRGGGVSRRIEGD-DRAELKEAMDQLEYPKGMS----IIARTAGIGRSA 176
             RY+V MP     G +S +IE + +R  LK+ +      +G+      I RTA  G  A
Sbjct: 117 PSRYLVYMPRTAHVG-ISLKIEDEAERERLKKVVSDCVAAEGIKEAGGFILRTAAEGAGA 175

Query: 177 PELQWDLNYLLKLWSAIDGAAKGGKGAFLIYQESSLVIRAIRDYFNHDIGDILIDTDDIY 236
            E+  D+ YL +LW  I    K      +IY++  L +R +RD  +  I  I ID+ + +
Sbjct: 176 DEILMDIRYLRRLWDQIGAQIKTIGAPSVIYEDLGLALRTLRDLVSPKIEKIRIDSRETF 235

Query: 237 DQAQQFMAHVMPEHAARVKRYRDDAALFSRFQIEHQIESAYARTVQLPSGGAIVIDHTEA 296
            +  QF+A +MPE A R++ Y  +  +F  + +E +I+ A  R V L SGG +V+D  EA
Sbjct: 236 QRTTQFVAELMPEIADRLEHYPGERPIFDLYGVEDEIQKALERKVPLKSGGYLVVDPAEA 295

Query: 297 LVSVDVNSARAIKGGDIEETATRTNLEAADEVARQMRLRDLGGLIVIDFIDMDESKNRRE 356
           + ++DVN+   +   ++EET  +TNLEAA  +ARQ+RLR+LGG+I+IDFIDM++ +++R+
Sbjct: 296 MTTIDVNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHQRQ 355

Query: 357 VESRLRDALRQDRARVQFGSISKFGLMEMSRQRLKPALSEGSSIPCPRCGGSGHIRDTES 416
           V   L   L +D A+     I++ GL++M+R+R + +L +    PC  C G G ++  E+
Sbjct: 356 VLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCSSCQGRGKLKTPET 415

Query: 417 SALQILRIIQEESMKDNTAAVHVQVPVEVASFLLNEKRPEIAKIE 461
              +I R I  E+         V    +V   LL+E+   +A++E
Sbjct: 416 VCYEIFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELE 460