Pairwise Alignments

Query, 1068 a.a., Ribonuclease E (EC 3.1.26.12) from Variovorax sp. SCN45

Subject, 485 a.a., endoribonuclease G (RNAse G) from Pseudomonas putida KT2440

 Score =  273 bits (699), Expect = 2e-77
 Identities = 167/465 (35%), Positives = 257/465 (55%), Gaps = 12/465 (2%)

Query: 2   KRMLINATQAEERRLAIVDGQKLLDYEIEIEGREQRKGNIYKAVVTRVEPSLEACFVDYG 61
           + +LIN T  E R +A+V+   L +  +E   R    GNIYK  V RV P ++A FVD G
Sbjct: 3   EEILINITPMESR-VAVVENGVLQEVHVERTQRRGIVGNIYKGKVVRVLPGMQAAFVDIG 61

Query: 62  EDRHGFLPFKEISKQYFAEGVSASQARIQDAIREGQELTVQVEKEERGNKGAALTTFISL 121
            +R  F+   EIS++   EG +     I   + EGQ L VQV K+  G KGA LTT +S+
Sbjct: 62  LERAAFIHASEISQR---EGSAVEN--ITALVHEGQALVVQVTKDPIGTKGARLTTQLSI 116

Query: 122 AGRYVVLMPNNPRGGGVSRRIEGD-DRAELKEA----MDQLEYPKGMSIIARTAGIGRSA 176
             RY+V MP +   G +S +IE + +R  LK+     MD          I RTA  G  A
Sbjct: 117 PSRYLVYMPRSSHVG-ISLKIEDEAERERLKQVVSDCMDGENIKDAGGFILRTAAEGARA 175

Query: 177 PELQWDLNYLLKLWSAIDGAAKGGKGAFLIYQESSLVIRAIRDYFNHDIGDILIDTDDIY 236
            E+  D+ YL +LW  I    K      +IY++  L +R +RD  N  I  I ID+ + +
Sbjct: 176 EEILQDIRYLRRLWEQIGTQIKTCGAPTVIYEDLGLALRTLRDLVNPKIEKIRIDSRETF 235

Query: 237 DQAQQFMAHVMPEHAARVKRYRDDAALFSRFQIEHQIESAYARTVQLPSGGAIVIDHTEA 296
            +  QF+  +MPE A R++ Y  +  +F  + +E +I+ A  R V L SGG +V+D  EA
Sbjct: 236 QKTTQFVGELMPEIADRLEHYPGERPIFDLYGVEDEIQRALERKVPLKSGGYLVVDPAEA 295

Query: 297 LVSVDVNSARAIKGGDIEETATRTNLEAADEVARQMRLRDLGGLIVIDFIDMDESKNRRE 356
           + ++DVN+   +   ++EET  +TNLEAA  +ARQ+RLR++GG+I+IDFIDM++  ++R+
Sbjct: 296 MTTIDVNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNIGGIIIIDFIDMEDEDHQRQ 355

Query: 357 VESRLRDALRQDRARVQFGSISKFGLMEMSRQRLKPALSEGSSIPCPRCGGSGHIRDTES 416
           V   L   L +D A+     I++ GL++M+R+R + +L +    PC  C G G ++  E+
Sbjct: 356 VLRTLEKQLERDHAKTNIIGITELGLVQMTRKRTRESLEQVLCEPCLACQGRGKLKTPET 415

Query: 417 SALQILRIIQEESMKDNTAAVHVQVPVEVASFLLNEKRPEIAKIE 461
              +I R I  E+         V    +V   LL+E+   +A++E
Sbjct: 416 ICYEIFREILREARAYQAEGYRVLANQKVVDRLLDEESGNVAELE 460