Pairwise Alignments

Query, 522 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  135 bits (339), Expect = 5e-36
 Identities = 127/492 (25%), Positives = 216/492 (43%), Gaps = 24/492 (4%)

Query: 16  ISLIALMFGLEISSVPVILPTLEKELQGDFSDMQWIMNAYTIACTTVLMAAGTLADRYGR 75
           +SL   M  L+ +   V LPT+   L   +    W++ ++ ++    L   G L+ R+G 
Sbjct: 21  LSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGE 80

Query: 76  KRILIIGIVLFGITSLICGLSQSAWLLIVSRFLQGLSGGAMLISQLAVLSHQFQQGKERS 135
            ++ I   +LF + S +CG++QS   L+  R LQG+  G +      +L   +   K R 
Sbjct: 81  VKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAK-RG 139

Query: 136 KAFAIWGVVFGMGLGFGPIVGGAIVALSNWQWVFLVHAPLAAVALALVLGSV-SESSDPD 194
            A A+  +V  +    GPI+GG I    +W W+F ++ P+   A A+V   + +      
Sbjct: 140 MALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRPVVTS 199

Query: 195 AQRLDLPGIVTLSLAVLGLTYFITQGPGIGF--GSPLALGILGASAASFAVFVWVEIINP 252
            Q +D  G++TL + V  L   + +G  + +   S + +G L  S    AVFV  E+ + 
Sbjct: 200 RQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSL-ISVVFLAVFVIWELTDR 258

Query: 253 HPMFDFSVFRIRNFSGALIGSAGMNFSFWPFMIYLPIYFQGALGYDAVTAGSALLAYTLP 312
           HP+ +  +F  RNF    I   G    F+   + LP + Q  +GY A  AG A+    L 
Sbjct: 259 HPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGLL 318

Query: 313 TLVMPPVAERMSLRWRPGVVIPLGLFVIGLGFMAMRLG-SGMADASWITMLPGCLLAGIG 371
            ++M P   + + R+   V+  L    IG     MR G +   D   + ++   L  GIG
Sbjct: 319 PVIMSPFVGKYAHRFDLRVLAGLAFLAIGTS-CYMRAGFTSEVDFQHVALVQ--LFMGIG 375

Query: 372 LGLTHTPVTNTATGSVPSTRAGMASGMDMSARLITLAINIAVMGFILLEGVHSHLKAALS 431
           + L   P  +     +P  +    SG+    R +  +   ++  +I +     H  A LS
Sbjct: 376 VALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQH-HAYLS 434

Query: 432 ASLDA--PQLRALAEKVAAGSFASLGESFPVLSQVDPSGATVHAALMHSFGWVMLFGAIG 489
             +    P  R   E++   S     +S+  L Q+        A +M +  +  L     
Sbjct: 435 EHISQFDPTTRHTLEQLGGAS----PQSYAQLEQI----LNGQAYMMSTVDYFTLMS--- 483

Query: 490 VWVLAGVSLLVF 501
            WV AG+ LLV+
Sbjct: 484 -WVFAGLILLVW 494