Pairwise Alignments

Query, 251 a.a., Response regulator receiver:LytTr DNA-binding region from Variovorax sp. SCN45

Subject, 248 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  139 bits (350), Expect = 5e-38
 Identities = 91/252 (36%), Positives = 138/252 (54%), Gaps = 13/252 (5%)

Query: 6   LKTLIVDDEALARSRLRTLLRDCNSPGAEVVAEAAQGAEAQQQLATLALDLVLLDVHMPG 65
           +  LIVDDE  AR RL  L+ D     A +   A  G EA   + +L  D+VLLD+ MPG
Sbjct: 1   MNVLIVDDEPQARERLSRLVSDLEGY-AVLEPSATTGEEALTLIDSLKPDVVLLDIRMPG 59

Query: 66  IDGIEVARALRSRADAPAVVFVTAHAAHAVTAFDLDAVDYLTKPVRAERLQQALQKAERF 125
           +DG++VA  L  R   PA+VF  A    +    +   V +LTKPV  E L +AL+KAER 
Sbjct: 60  LDGLQVAARLSERESPPALVFCAAGDEFSAETLEASGVSFLTKPVAGEALLKALKKAERP 119

Query: 126 LKERRALQAEAAPET-------VLIQDRGRAERVPLSEVLYLKSEYKYLTVRTATRSHIL 178
            + + A   + A ++       +  + R   E +PL EV+Y  +++KY+T+R      +L
Sbjct: 120 TRVQLAALTQPAAQSGNGPRSHISARTRKGIELIPLGEVVYFIADHKYVTLRHQGGEVLL 179

Query: 179 DGSLNEFEERYPHRFLRVHRNALVARAAIRALEKYDDGEDAEGWALRLDAI-PEPVAVSR 237
           D  L   E+ +  RF+R+HRNALVAR  I  L++   G     + L L  +  + + VSR
Sbjct: 180 DEPLKALEDEFGDRFVRIHRNALVARERIERLQRTPLGH----FQLFLKGLNGDALIVSR 235

Query: 238 RQLAAVREVIKE 249
           R +A VR+++++
Sbjct: 236 RHVAGVRKMMQQ 247