Pairwise Alignments

Query, 251 a.a., Response regulator receiver:LytTr DNA-binding region from Variovorax sp. SCN45

Subject, 247 a.a., Positive alginate biosynthesis regulatory protein from Pseudomonas putida KT2440

 Score =  131 bits (329), Expect = 1e-35
 Identities = 89/251 (35%), Positives = 137/251 (54%), Gaps = 14/251 (5%)

Query: 6   LKTLIVDDEALARSRLRTLLRDCNSPGAEVVAEAA-QGAEAQQQLATLALDLVLLDVHMP 64
           +  LIVDDE   R RL  LL +    G  V+  +A  G EA   + +L  D+VLLD+ MP
Sbjct: 1   MNVLIVDDEPQGRERLTRLLGELE--GYTVLEPSATNGDEALALIESLKPDVVLLDIGMP 58

Query: 65  GIDGIEVARALRSRADAPAVVFVTAHAAHAVTAFDLDAVDYLTKPVRAERLQQALQKAER 124
           G+DG++VA  L  R   PAVVF +    +   AF    + ++TKP +A  L+ AL+KAE+
Sbjct: 59  GLDGLQVAARLCEREAPPAVVFCSGDDEYGAEAFKDSTLSHVTKPFQAHALRDALRKAEK 118

Query: 125 FLKERRALQAEAAPE------TVLIQDRGRAERVPLSEVLYLKSEYKYLTVRTATRSHIL 178
             + + A     A E       +  + R   E +PL +V+Y  +++KY+T+R      +L
Sbjct: 119 PNRAQLAALTRPANEGGGPRSHISARTRKGIELIPLPQVIYFIADHKYVTLRHEAGEVLL 178

Query: 179 DGSLNEFEERYPHRFLRVHRNALVARAAIRALEKYDDGEDAEGWALRLDAIP-EPVAVSR 237
           D  L   E+ +  RF+R+HRNALVAR  I  L++   G     + L L  +  + + VSR
Sbjct: 179 DEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGH----FQLYLKGLDGDALTVSR 234

Query: 238 RQLAAVREVIK 248
           R +A VR++++
Sbjct: 235 RHVAGVRKMMQ 245