Pairwise Alignments

Query, 256 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 233 a.a., Probable transmembrane protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 85.9 bits (211), Expect = 7e-22
 Identities = 83/260 (31%), Positives = 112/260 (43%), Gaps = 34/260 (13%)

Query: 3   LIAHPELLELLAASHALGTLRGGARRRFEALAREQAPVRAAALVWQGRLASMTELQPSIT 62
           + AH  + EL A+++ LGTL    RR  ++     A +R A   W+GRL  +T L  ++ 
Sbjct: 1   MTAHDPIDEL-ASAYVLGTLSAERRREVQSRLPTDAALRDAVDGWEGRLLPLTALVEAVE 59

Query: 63  PDPAVWTRIRNMIDAEQSKLAIERQRDAANARAADKAQQPQQGGWLRSLALWRGATAAGA 122
           P PA+W RI               +R  A  RA  +A   Q   W  SL  WR   A G 
Sbjct: 60  PSPALWARI---------------ERGIAPRRAPAQASAWQT--WWSSLGFWRAVAATGF 102

Query: 123 LATVLAVTIGLNLRDQLHNAPAVQYVAVLSDDKDAASMLVTFDPKKKQLVLQRVGGFSEG 182
           +A   A  + L     L    A QY+ VL      A   V        L L  +G  +  
Sbjct: 103 VA---ASVVALLPSTGLFAPAAPQYMVVLVAPNGTAPGWVVQTSGANTLRLVPLGTTAVP 159

Query: 183 DDKSLQLWALPPG-GAPRSLGVLDNAPGLRLAASESDVHAVPALA------ISLEAKGGV 235
           D +SLQ W    G  AP SLG++   PG  L   E  +  +P L       I+LE   G 
Sbjct: 160 DQRSLQFWTKADGWNAPVSLGLVQ--PGQPL---EVKLDQLPPLVPNQLFEITLEPYNGS 214

Query: 236 PAGSGPKGPILFKGALIEKT 255
           P G  P GPIL+ G  ++ T
Sbjct: 215 PTGR-PTGPILYIGRAVKLT 233