Pairwise Alignments

Query, 367 a.a., Ammonia monooxygenase from Variovorax sp. SCN45

Subject, 342 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  162 bits (409), Expect = 2e-44
 Identities = 123/348 (35%), Positives = 174/348 (50%), Gaps = 35/348 (10%)

Query: 26  TLLLALAAAGACLVLHTPLPWMIGPLIAVSLA------SIAGLPTASHTPLRNAGQWTIG 79
           T L+ LA      ++  PLP+M+G L+A+ L        +A +P       R  GQW +G
Sbjct: 12  TPLVGLAGGYLASLVGWPLPYMVGSLLAIILVRCLTPWQLAEIPGG-----RKCGQWVVG 66

Query: 80  MALGLYFTPHVVSLVASVWWAI---ALAIGWALLLGWGFGRWLHGVHSARMPHVPEKSMR 136
           + +GL+FTP V+  V S +  I   AL    + ++G     WL       M    E   R
Sbjct: 67  IGIGLHFTPVVIEQVMSHFGLIFFGALVTSMSSVVGV----WL-------MRRSGED--R 113

Query: 137 ATTYFSGAIGGASEMTLMAESAGARTDLVAAAHSLRLVVVTVTIPFAMQWSGLHGLEINP 196
           AT +FS   GG+ EM  +    GA    VAA  SLR++VV + +P   ++     LE   
Sbjct: 114 ATAFFSSMPGGSGEMVNLGARNGAVLSRVAAGQSLRVLVVVLCVPAIFKYL----LEGGT 169

Query: 197 PGVREVNPGGLALLAAATGLGGLAM---RALKRTNPWFIGPLLVAMGFTMAGQSLSAVPT 253
           P      P     L A   +G L     + L++ NPW  GPLLV+   ++       +P 
Sbjct: 170 PQFHPA-PVSWPWLLALFPMGALVAWGWQRLRQPNPWLFGPLLVSATASVIWDLHIGLPD 228

Query: 254 WMSNTAQLVIAVSLGVRFSREFLHTAPRWLGSVVLGTFGMLALCGGVAWLLAAATGLHPA 313
             S   Q +I   LG  F+R+F   AP ++G  ++GT   +AL    A  L+A T L   
Sbjct: 229 GGSQIGQWLIGSGLGCHFNRQFFRRAPSFMGRTLIGTALTMALATLAAVGLSALTHLDLR 288

Query: 314 TMILGTSPGGIAEMSITAKVLQLGVPVVTAFQVCRLVAVLLLVGPMFR 361
           ++ LG  PGGIAEMS+TA+ LQL VP+VTA QV RL+ VL L  P+FR
Sbjct: 289 SLTLGMMPGGIAEMSLTAETLQLSVPLVTAMQVMRLLFVLFLAEPLFR 336