Pairwise Alignments

Query, 261 a.a., RNA (nucleoside 2'-O)-methyltransferase from Variovorax sp. SCN45

Subject, 280 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 40.8 bits (94), Expect = 3e-08
 Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 12/144 (8%)

Query: 118 VVLDRLQDAGNAGSILRSAAAFGFTQVIALKGTAALWAPKVLRAGMGAHFGLRLIEGVEA 177
           ++LDR+ D  N GSI R+A   G   ++      A      ++   GA   L ++     
Sbjct: 119 LILDRVTDVRNFGSIARNAECMGVDAIVIPSRGGAQINADAMKTSAGA---LNIVPVCRE 175

Query: 178 -------EALDALTVPLLATSSHRGEWL--HKADLPHPCAWLMGHEGQGVSAALEARATH 228
                  E L      ++A +      L  +  D+  P A +MG E  G+S     RA  
Sbjct: 176 PNLKDTLEYLKEYGFQVVACTEKTEHQLSDYAVDMVGPTAIIMGSEEDGISPEYLKRADV 235

Query: 229 HIRIAQPGGEESLNVAAAAAICLH 252
            +RI   G   SLNV+ A  I L+
Sbjct: 236 KLRIPLMGQIGSLNVSVATGIILY 259