Pairwise Alignments

Query, 465 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 444 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  281 bits (720), Expect = 2e-80
 Identities = 173/446 (38%), Positives = 261/446 (58%), Gaps = 13/446 (2%)

Query: 10  AQPSLKRRLIRQLVLLQVAIQLVVIGALAATGQLIDFSSPENTV-----EILQEAVAREA 64
           + PSL  +L  QL ++  A+  VVI  L   G +I   SP   +     + L E+++ + 
Sbjct: 7   SNPSLWWQLSWQLSIVVSAMIAVVIVGLCVYGLMI--LSPNIALWGDLSDALDESLSLDP 64

Query: 65  DGRLSMRPTERLAALRRAQPGLWFSVRDAQGRQVVEGRIPPEFARIGDTLDQVRQARLGW 124
              L +     L AL      LWF+V    GR    G +P  +A +   L  +  A +  
Sbjct: 65  QKGLVVIDGPMLRALTAENGTLWFAVSTLDGRVATYGAVPTAYAELSRYLYLLTDADIRG 124

Query: 125 NIGDAPRQSARMRWVDSPAGEVQILTGADSPITWRNLGLSVLLLLLKVVLPIMAITVTAT 184
             G A  + A +  +++  G V+++ G  + +  R   L++L    K+ +P++A+ + A 
Sbjct: 125 GKGTA--EGAMVESLETRWGPVRVMFGGSTHV--RAQFLTLLAETYKIYVPLLAVILPAV 180

Query: 185 LLATHFVVRRTLAGLNAAAARAGQIDADQRGVRLPLSDVPGEVATLVAAFNDALQRLDDG 244
             +   +VR+ LAGL++   +A +ID  + G +LP+ DVP EV  L+ +FN  L+RL++ 
Sbjct: 181 FFSVPRIVRQALAGLSSVVKKAPEIDPRRGGSKLPVEDVPREVVPLILSFNSILERLEEQ 240

Query: 245 HARHERFLADAAHELRTPLAILNTRLDNLPDSAEKTRLLADAARLSVLAGQLLDLQRMKG 304
               +RFL DAAHELRTP+AI+ TR++ LP   E+ RLLAD ARL   A QLL  +R   
Sbjct: 241 FRARQRFLIDAAHELRTPIAIMQTRIEGLP-GPERQRLLADVARLGETAEQLLAFERNDQ 299

Query: 305 REERRQRVDLVDMAREVVAEMAPLALASGYDISFEPQAGRVEIDGDRDALSRALTNLVRN 364
             +RR+RVDLVD+ R VVA++APLAL++GYDI+FE      E+ G+   L RA++N+VRN
Sbjct: 300 VNDRRERVDLVDITRTVVADLAPLALSAGYDIAFETAVVAYELQGNPFTLPRAISNIVRN 359

Query: 365 AIDHAGGQGSVVVRVDASGDVDVIDDGPGIPPAQRAHVFKPFYRVHASGPGAGLGLSLVQ 424
           AIDH G +G + V V A G+V + D+G GI   Q+  +F+PFYR+     GAGLGLSLV+
Sbjct: 360 AIDHGGNKGMIHVSVLADGEVVISDEGQGIAEDQQQRIFEPFYRITPRSTGAGLGLSLVK 419

Query: 425 EIVRLHGGEVSVHDGPEGGALFRMRF 450
           +IV +HGG V + +    G+ FR+RF
Sbjct: 420 QIVAIHGGRVFL-ESSAFGSTFRLRF 444