Pairwise Alignments

Query, 1082 a.a., Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) from Variovorax sp. SCN45

Subject, 627 a.a., 3-methylcrotonyl-CoA carboxylase from Pseudomonas simiae WCS417

 Score = 61.2 bits (147), Expect = 2e-13
 Identities = 86/387 (22%), Positives = 160/387 (41%), Gaps = 61/387 (15%)

Query: 111 YTGAATNKPVELIGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKS-- 168
           +  A     +  IG +PEAI+    +   K AM   G+         + D++   +++  
Sbjct: 93  FARACQQAGLTFIGPSPEAIELMGSKRLSKLAMLDAGVPCIAGYQGSAQDDSTLQREADA 152

Query: 169 VGFPTVIRPSFTLGGTGGGIAYNPEE----FETICKRGIEASPTNELLIEESLLGWKEYE 224
           +G+P +I+ S   GG G  +  +PEE      T       A  + EL++E++L+  +  E
Sbjct: 153 IGYPLMIKASAGGGGRGMRLVQHPEELLDNLHTARSEAKNAFGSGELILEQALIDPRHVE 212

Query: 225 MEVVRDKADNCIIV----CSIENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLR 280
           +++  D   + I +    CSI+            I  AP   ++ +  Q +  A+L   R
Sbjct: 213 IQLFGDSHGHLIYLGERDCSIQR------RHQKIIEEAPCPVMTPELRQAMGEAALNAGR 266

Query: 281 EIGVDTGGSNVQFSINPKDGRMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLD 340
            +    G   V+F ++ ++GR   +EMN R+     +    TG  +     ++A G  L 
Sbjct: 267 AVNY-VGAGTVEFLLD-RNGRFYFLEMNTRLQVEHPVTELITGLDLVDWQLQIAAGQPLP 324

Query: 341 ELRNEIT----------------GGATPAS-----FEPS----IDYVVTKIPRFAFEKFP 375
             + +++                 G  P +     ++P+    ID+ VT+  R +    P
Sbjct: 325 LTQPDVSLNGHAMEVRLYAEDPAQGFLPQTGEVLRWDPAAGVRIDHGVTEGQRIS----P 380

Query: 376 QADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNEKTQDREVLEKELGEPGP 435
             D  L       G+++A G T +E+ +K LR +E  V  L   T ++ +L   L  P  
Sbjct: 381 FYDPML-------GKIIAYGATREEARRKLLRAVEDTV--LLGVTTNQPLLVDLLKHPD- 430

Query: 436 ERIWYVGDAFAMGLSVDEVFALTKIDP 462
               +VG  F+ G   +    +  + P
Sbjct: 431 ----FVGGDFSTGFIAEHFSEIRPLTP 453



 Score = 52.4 bits (124), Expect = 1e-10
 Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 33/239 (13%)

Query: 659 GVPIIGTSPDMIDAAEDRE--RFQKLLHELKLLQPPNATARTEAEALEKAAALGYPLVVR 716
           G+  IG SP+ I+    +   +   L   +  +     +A+ ++    +A A+GYPL+++
Sbjct: 101 GLTFIGPSPEAIELMGSKRLSKLAMLDAGVPCIAGYQGSAQDDSTLQREADAIGYPLMIK 160

Query: 717 PSYVLGGRAMEIVHEQRD----LERYMREAVKVSNDSPVLLDRFLNDAVECDVDCLRDAE 772
            S   GGR M +V    +    L     EA        ++L++ L D    ++    D+ 
Sbjct: 161 ASAGGGGRGMRLVQHPEELLDNLHTARSEAKNAFGSGELILEQALIDPRHVEIQLFGDSH 220

Query: 773 GQTLIGGVMEHIEQAGVHSGDSACSL----------PPYSLSADTVAELKRQSAAMAA-A 821
           G               ++ G+  CS+           P  +    + +   ++A  A  A
Sbjct: 221 GHL-------------IYLGERDCSIQRRHQKIIEEAPCPVMTPELRQAMGEAALNAGRA 267

Query: 822 LNVVGLMNVQFAIQQKDGKDVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSL 880
           +N VG   V+F +   D     Y LE+N R     P     TG+ L     +  AGQ L
Sbjct: 268 VNYVGAGTVEFLL---DRNGRFYFLEMNTRLQVEHPVTELITGLDLVDWQLQIAAGQPL 323