Pairwise Alignments

Query, 1082 a.a., Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) from Variovorax sp. SCN45

Subject, 939 a.a., carbamoyl-phosphate synthase, large subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  908 bits (2346), Expect = 0.0
 Identities = 478/933 (51%), Positives = 646/933 (69%), Gaps = 27/933 (2%)

Query: 1   MPKRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT 60
           MPK   +K +LIIG+GPI+IGQACEFDYSG QA ++LREEG  V LINSNPATIMTDP T
Sbjct: 1   MPKDNSIKHVLIIGSGPIVIGQACEFDYSGSQAARSLREEGITVTLINSNPATIMTDPVT 60

Query: 61  ADVTYIEPITWQTVEKIIAKERPD--AILPTMGGQTALNCALDLWRNGVLDKYTGAATNK 118
           AD  Y+ P+  +++ KI+ +E PD   +LPTMGGQTALN A++  + G+ D++       
Sbjct: 61  ADNVYLLPLEKKSLVKIL-EEHPDIDCVLPTMGGQTALNLAIEADKAGIWDRFK------ 113

Query: 119 PVELIGATPEAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMDEAWAVQKSVGFPTVIRPS 178
            V +IG   +AI+ AE+R KFK  + ++ +G      A S  +   + + +GFP VIRPS
Sbjct: 114 -VRMIGVDIDAIETAENREKFKALLEELNVGVCIGKTATSFLQGKEIAQEIGFPLVIRPS 172

Query: 179 FTLGGTGGGIAYNPEEFETICKRGIEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIV 238
           +TLGGTGGG     EEFE     G++ASPT+E+LIE+S+LGWKEYE+EV+RD   N +++
Sbjct: 173 YTLGGTGGGFVEKEEEFENALMSGLKASPTHEVLIEQSILGWKEYELEVLRDSLGNMVVI 232

Query: 239 CSIENLDPMGVHTGDSITVAPAQTLSDKEYQILRNASLAVLREIGVDTGGSNVQFSINPK 298
           CSIEN DPMGVHTGDSITVAPA TL D  YQ +RN ++ ++  IG   GG NVQFS++P 
Sbjct: 233 CSIENFDPMGVHTGDSITVAPAMTLPDTVYQEMRNLAIKMMNGIGNFAGGCNVQFSVSPD 292

Query: 299 DGRMVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPS 358
           +  ++ IE+NPRVSRSSALASKATG+PIAKVAAKLA+GY LDEL+N ITG +T A FEP+
Sbjct: 293 NQTIIGIEINPRVSRSSALASKATGYPIAKVAAKLAIGYNLDELKNSITG-STSAFFEPA 351

Query: 359 IDYVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLN- 417
           IDYV+ KIPR+ F+KF  +D RL   MK+VGEVM +G  FQE+ QKA + LE+  +GL  
Sbjct: 352 IDYVIVKIPRWNFDKFKGSDRRLGLSMKAVGEVMGIGGNFQEALQKACQSLEIKRNGLGA 411

Query: 418 --EKTQDREVLEKELGEPGPERIWYVGDAFAMGLSVDEVFALTKIDPWFLVQIEEIVKIE 475
             ++ +++E +   L  P   R++++ DAF +G+S   +  LTKID WFL QIEE+V ++
Sbjct: 412 DGKELKNQEQILYSLEHPSWNRLFHIYDAFKLGISFRTIHDLTKIDKWFLKQIEELVHLD 471

Query: 476 LELETKSLDDIDRDTLLALKKKGFSDRRLARQLKTTDTAIREKRR-ALGVRPVYKRVDTC 534
           + L+  +LD I +D ++  K KG++DR++A  L   ++ +  KRR  +G++ VYK VDTC
Sbjct: 472 ITLDKYTLDTIPKDLMMLAKHKGYADRQIAHLLGCLESEVFNKRRDEMGIKRVYKLVDTC 531

Query: 535 AAEFATNTAYMYSTYEDECEADPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDG 594
           AAEF   T Y YS++ +E E+  +D+KK++VLG GPNR+GQGIEFDY CVH  LA +E G
Sbjct: 532 AAEFEAQTPYYYSSFGEENESQVSDRKKVIVLGSGPNRVGQGIEFDYSCVHGVLAAKECG 591

Query: 595 YETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPLGVIVQYGGQTPLKLALD 654
           YETIM+NCNPETVSTD+D +D+LYFEP+  E + EI+  EKP GVIVQ GGQT LKLA  
Sbjct: 592 YETIMINCNPETVSTDFDIADKLYFEPVFWEHIYEIILHEKPEGVIVQLGGQTALKLAEK 651

Query: 655 LEANGVPIIGTSPDMIDAAEDRERFQKLLHELKLLQPPNATARTEAEALEKAAALGYPLV 714
           LE  G+ I+GTS + +D AEDR  F  LL E  +  P   T  +  EALE    +G+PL+
Sbjct: 652 LEKYGIKILGTSFEALDLAEDRGEFSSLLKENDVPYPEFGTIHSTDEALELCKTIGFPLL 711

Query: 715 VRPSYVLGGRAMEIVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAVECDVDCLRDAEGQ 774
           VRPSYVLGG+ M+IV  +++LE+++ E +K   D+ +LLD FL  A+E + D + D E  
Sbjct: 712 VRPSYVLGGQGMKIVINEKELEQHVVEVLKDIPDNEILLDHFLEGAIEAEADAICDGENV 771

Query: 775 TLIGGVMEHIEQAGVHSGDSACSLPPYSLSADTVAELKRQSAAMAAALNVVGLMNVQFAI 834
            +I G+M+HIE AG+HSGDS   LPPY+L    V +++  +  +A AL   GL+N+QFA+
Sbjct: 772 YII-GIMQHIEPAGIHSGDSYAVLPPYNLGDLVVRQIETFTEKIALALKTKGLINIQFAV 830

Query: 835 QQKDGKDVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQSLKSQGVTKEVTPPY- 893
           +     D +YV+E NPRASRTVP++ KA        A + M G++     VT     PY 
Sbjct: 831 KD----DKVYVIEANPRASRTVPFICKAYKEPYVNYAVKVMLGEN----KVTDFEFKPYK 882

Query: 894 --FSVKEAVFPFVKFPGVDTILGPEMKSTGEVM 924
             +++KE VF F KFP V+  LGPEMKSTGE +
Sbjct: 883 KGYAIKEPVFSFHKFPNVNKELGPEMKSTGEAI 915



 Score =  216 bits (549), Expect = 8e-60
 Identities = 138/393 (35%), Positives = 210/393 (53%), Gaps = 18/393 (4%)

Query: 561 KKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPETVSTDYDTSDRLYFE 620
           K ++++G GP  IGQ  EFDY    AA ++RE+G    ++N NP T+ TD  T+D +Y  
Sbjct: 8   KHVLIIGSGPIVIGQACEFDYSGSQAARSLREEGITVTLINSNPATIMTDPVTADNVYLL 67

Query: 621 PLTLEDVLEIVDKEKPLG-VIVQYGGQTPLKLALDLEANG------VPIIGTSPDMIDAA 673
           PL  + +++I+++   +  V+   GGQT L LA++ +  G      V +IG   D I+ A
Sbjct: 68  PLEKKSLVKILEEHPDIDCVLPTMGGQTALNLAIEADKAGIWDRFKVRMIGVDIDAIETA 127

Query: 674 EDRERFQKLLHELKLLQPPNATARTEAEALEKAAALGYPLVVRPSYVLGGRAMEIVHEQR 733
           E+RE+F+ LL EL +      TA +  +  E A  +G+PLV+RPSY LGG     V ++ 
Sbjct: 128 ENREKFKALLEELNVGVCIGKTATSFLQGKEIAQEIGFPLVIRPSYTLGGTGGGFVEKEE 187

Query: 734 DLERYMREAVKVSNDSPVLLDRFLNDAVECDVDCLRDAEGQTLIGGVMEHIEQAGVHSGD 793
           + E  +   +K S    VL+++ +    E +++ LRD+ G  ++   +E+ +  GVH+GD
Sbjct: 188 EFENALMSGLKASPTHEVLIEQSILGWKEYELEVLRDSLGNMVVICSIENFDPMGVHTGD 247

Query: 794 SACSLPPYSLSADTVAELKRQSAAMAAAL-NVVGLMNVQFAIQQKDGKDVIYVLEVNPRA 852
           S    P  +L      E++  +  M   + N  G  NVQF++   +    I  +E+NPR 
Sbjct: 248 SITVAPAMTLPDTVYQEMRNLAIKMMNGIGNFAGGCNVQFSVSPDN--QTIIGIEINPRV 305

Query: 853 SRTVPYVSKATGIQLAKVAARCMAGQSLKS-----QGVTKEVTPP---YFSVKEAVFPFV 904
           SR+    SKATG  +AKVAA+   G +L        G T     P   Y  VK   + F 
Sbjct: 306 SRSSALASKATGYPIAKVAAKLAIGYNLDELKNSITGSTSAFFEPAIDYVIVKIPRWNFD 365

Query: 905 KFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKS 937
           KF G D  LG  MK+ GEVMG+G  F EA  K+
Sbjct: 366 KFKGSDRRLGLSMKAVGEVMGIGGNFQEALQKA 398