Pairwise Alignments

Query, 255 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  128 bits (321), Expect = 1e-34
 Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 4/240 (1%)

Query: 13  RFIDPALLFIVLAVLWEKSVDVFGIKRYLLPPLSQVLDSLWSNRMALLAQSWVTTQEVLA 72
           R + P L+  +L  +W+ +   + +  YL+P  + +  +L ++   LL   W+T +    
Sbjct: 16  RIVSPLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRTLVADGPMLLGALWMTLKITFL 75

Query: 73  GFALAAIGGVLLGLAIHAVPVVRRMLYPLIVVFQGLPKIALAPLMVIWFGYGDTSKILMA 132
            FALA + G L         VV   L+P  ++ Q  P +A+APL++IW      + ++ A
Sbjct: 76  SFALAVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIIIWCSDTTLALVICA 135

Query: 133 FLFAFFPVVIATMGGLAGTPAHLVEHFRAIRAPAWTTFRRLYVPSALPSIMDGCKSAMPL 192
            L A FP++  T+ GL      L+  F   RA  W    RL +PSALP    G + A  L
Sbjct: 136 TLVAIFPIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSALPCFFAGLRIASGL 195

Query: 193 AVIGAIVGEFV----GSERGLGHLILEANANARTDYLFAALVVISAVAGLLYVLVELAAK 248
           A+IGA+V EFV    G+  GL + IL+A        LFAALV+I+     L+ L+ L A+
Sbjct: 196 ALIGAVVAEFVAGTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALTGVALFSLMALLAR 255