Pairwise Alignments

Query, 255 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score =  100 bits (250), Expect = 2e-26
 Identities = 66/246 (26%), Positives = 120/246 (48%), Gaps = 17/246 (6%)

Query: 17  PALLFIVLAVLWEKSVDVFGIKRYLLPPLSQVLDS---------LWSNRMALLAQSWVTT 67
           P  L ++L  +W+ +V    +   +LP  S V+ +         +W++   L    W   
Sbjct: 15  PWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTH---LAISGWRAG 71

Query: 68  QEVLAGFALAAIGGVLLGLAIHAVPVVRRMLYPLIVVFQGLPKIALAPLMVIWFGYGDTS 127
              + G ++  + G + GL+        R+L   + + + +P +AL PL+++WFG  +++
Sbjct: 72  LGFVIGGSIGLVLGFITGLSNWG----ERLLDSSVQMIRNVPHLALIPLVILWFGIDESA 127

Query: 128 KILMAFLFAFFPVVIATMGGLAGTPAHLVEHFRAIRAPAWTTFRRLYVPSALPSIMDGCK 187
           KI +  L   FP+ + T  G+      LVE  R+     +  FR++ +P ALPSI+ G +
Sbjct: 128 KIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSILVGVR 187

Query: 188 SAMPLAVIGAIVGEFVGSERGLGHLILEANANARTDYLFAALVVISAVAGLLYVLVELAA 247
            A+    +  IV E + +  G+G+L + A    +TD +  A +V+ AV G +  L     
Sbjct: 188 FALGFMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVLA-IVLYAVLGKIADLAARGL 246

Query: 248 KRVWWR 253
           +RVW R
Sbjct: 247 ERVWLR 252