Pairwise Alignments

Query, 255 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 258 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  114 bits (286), Expect = 2e-30
 Identities = 69/246 (28%), Positives = 123/246 (50%), Gaps = 8/246 (3%)

Query: 13  RFIDPALLFIVLAVLWEKSVDVFGIKRYLLPP----LSQVLDSLWSNRMALLAQSWVTTQ 68
           R I  ALL ++L   W+  V    I R+  P     + QV+D  W           +T  
Sbjct: 7   RIIQVALLVVLLGG-WQLGVSSGAIDRFFFPAPYDIVKQVID--WVADAGFYKHVGITLS 63

Query: 69  EVLAGFALAAIGGVLLGLAIHAVPVVRRMLYPLIVVFQGLPKIALAPLMVIWFGYGDTSK 128
           E + G+ +    GV  G+ +   P V R+L P I     +P++ LAP+ V+W G G  SK
Sbjct: 64  ETVLGYIIGTGLGVGAGVWLGLSPFVARVLDPFIKAVNAIPRVVLAPIFVLWLGLGLWSK 123

Query: 129 ILMAFLFAFFPVVIATMGGLAGTPAHLVEHFRAIRAPAWTTFRRLYVPSALPSIMDGCKS 188
           + +A    FF      M G+      ++ + R + A      R +Y P+A   I+   ++
Sbjct: 124 VALAVTLVFFVTFFNAMQGVREVNPVVLSNTRILGAKRSDLLRHVYFPAAASWILSSLRT 183

Query: 189 AMPLAVIGAIVGEFVGSERGLGHLILEANANARTDYLFAALVVISAVAGLLYVLVELAAK 248
           ++  AV+GAI+GE++G+  GLG+LI  +  N     +FA +++++    ++ +++++A K
Sbjct: 184 SVGFAVVGAIIGEYLGASAGLGYLIARSEGNFDAVGVFAGIIILAVFVLIIDLILDVAEK 243

Query: 249 R-VWWR 253
           + + WR
Sbjct: 244 KLITWR 249