Pairwise Alignments

Query, 255 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 291 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  102 bits (255), Expect = 7e-27
 Identities = 73/259 (28%), Positives = 126/259 (48%), Gaps = 21/259 (8%)

Query: 1   MNQPVPRSEAWRRFIDPALLFIVLAVLWEKSVDVFGIKRYLLPPLSQVLDSLW------- 53
           +N P  R +A R    P    ++           F  +R +LP   Q+   LW       
Sbjct: 29  LNMPFARDQATRAGQTPGFFQLL--------PQTFAQERPVLPAPHQIAAELWDTTVNKA 80

Query: 54  -SNRMALLAQSWVTTQEVLAGFALAAIGGVLLGLAIHAVPVVRRMLYPLIVVFQGLPKIA 112
            +++ +L+  + +T    L GFA+ A+ G+LL +AI     + R + P I+  Q +P +A
Sbjct: 81  ITSKRSLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNRAMDRSVMPWIIASQTIPILA 140

Query: 113 LAPLMVIWFGY----GDTSKILMAFLFAFFPVVIATMGGLAGTPAHLVEHFRAIRAPAWT 168
           +AP++++        G   K L++   +FFP+V+  + GL       ++      A    
Sbjct: 141 IAPMIIVVLNSIGISGLLPKALISTYLSFFPIVVGMVKGLRSPETLQLDLMHTYNASPAQ 200

Query: 169 TFRRLYVPSALPSIMDGCKSAMPLAVIGAIVGEF-VGSERGLGHLILEANANARTDYLFA 227
            F +L  PSALP +    K A+ +A++GAIVGE   G+  GLG  +L  +   +T  ++A
Sbjct: 201 IFWKLRWPSALPYLFTSLKIAIAIALVGAIVGELPTGAVAGLGARLLSGSYYGQTVQIWA 260

Query: 228 ALVVISAVAGLLYVLVELA 246
           AL + + VA LL  ++ +A
Sbjct: 261 ALFMAAGVAALLVSIIGIA 279