Pairwise Alignments

Query, 516 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  110 bits (275), Expect = 1e-28
 Identities = 108/496 (21%), Positives = 193/496 (38%), Gaps = 29/496 (5%)

Query: 23  IGLVTAIDYFDNALFAFFASYIAGGVNASPDELVWASSAYALGAVLGILHQHAWVERLGY 82
           + L T +   D  +       I+G +  S ++  W  +++A+   + +        R G 
Sbjct: 21  LSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGE 80

Query: 83  RRYLAVCMFAFALGGVGAALCDSSMQLTAARAVQGYFVGPMLGACRILIQIGIAPARRAQ 142
            +        F L      +  S  +L   R +QG   GP+    + L+     PA+R  
Sbjct: 81  VKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGM 140

Query: 143 ALKAFMVLIVFGGALAPIAGAFLVTNFDWRWLFACTAPAAALIGLLV---LWTLPDIGDV 199
           AL    ++ V      PI G ++  ++ W W+F    P       +V   + T P +   
Sbjct: 141 ALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRPVVTSR 200

Query: 200 APHERTEPHYIAYVVFALAQAALQVVLTRSH-FELFTGSPALIGLTLAGVAGLAWFGWQQ 258
            P +     YI  +   +   ALQVVL + +  + F  S  ++G  ++ V    +  W+ 
Sbjct: 201 QPMD-----YIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWEL 255

Query: 259 W-RHPAPLVRLHALRNASFRVGLALYVVYYYLSTGFSYLLPRMMEGGLGFTVGNTGYFTG 317
             RHP   +RL   RN  FR+G  + V  Y    G + +LP+ ++  +G+T    G    
Sbjct: 256 TDRHPVVNLRLFVHRN--FRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVA 313

Query: 318 AASLATGLLVFVYLKYSARLTRKKWLIVAGFGIAAL--AAWWLSRVTPQAGREALLGPLL 375
              L   ++     KY+ R   +   ++AG    A+  + +  +  T +   + +    L
Sbjct: 314 PIGLLPVIMSPFVGKYAHRFDLR---VLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQL 370

Query: 376 LRGLLMLFVVLPVANLTFRPFAAEEFAHGYRLKNLVRQLAISFATSSVIALQQHRLALHE 435
             G+ +    +P  ++        + A G  L   +R L  SFA S    +   R   H 
Sbjct: 371 FMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHH 430

Query: 436 VRLGESANPANASFMQALESLTHGFAAAGHAAGEAHAMALGTLYRTLEQQATFMASLDGF 495
             L E  +  + +    LE L           G A   +   L + L  QA  M+++D F
Sbjct: 431 AYLSEHISQFDPTTRHTLEQL-----------GGASPQSYAQLEQILNGQAYMMSTVDYF 479

Query: 496 TAMAVIALAAGVFAAW 511
           T M+ +  A  +   W
Sbjct: 480 TLMSWV-FAGLILLVW 494