Pairwise Alignments

Query, 315 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) from Variovorax sp. SCN45

Subject, 294 a.a., 16S rRNA 2'-O-ribose C1402 methyltransferase from Pseudomonas putida KT2440

 Score =  217 bits (553), Expect = 2e-61
 Identities = 134/299 (44%), Positives = 177/299 (59%), Gaps = 16/299 (5%)

Query: 13  LAAAHDAAGAQHYPQGTLYVVATPIGNLADITLRALHVLQLVDAIACEDTRHTQSLLRAY 72
           + A  D AGA     GTLYVVATPIGNL D++ RAL VL  V  IA EDTRH+  LL+ +
Sbjct: 1   MCAVTDVAGASKSTVGTLYVVATPIGNLDDMSARALKVLADVALIAAEDTRHSIRLLQHF 60

Query: 73  GIDRPGARLLAVHQHNEAEAAQTVVARLAQGERIAYVSDAGTPGVSDPGARLAAAVRAAG 132
           GID P   L A H+HNE +     +++L  GE +A VSDAGTP +SDPG  L    RAAG
Sbjct: 61  GIDTP---LAACHEHNERDEGGRFLSKLLAGENVALVSDAGTPLISDPGYHLVRQARAAG 117

Query: 133 QRVLPLPGASSVTTLVGAAGLVADGGDGNASSAFVFAGFLPSKAGERDTAVQALSQEPRA 192
             V+P+PGA ++   + AAGL +D         F+F GFLP+K   R   ++ + +EPR 
Sbjct: 118 VSVVPVPGACALIAALSAAGLPSD--------RFIFEGFLPAKQAGRRARLEQVREEPRT 169

Query: 193 VVLLEAPHRIESLARALATL--GERRITVGRELTKQFEEIATVAASALPDWFGADRDRTR 250
           ++  EAPHRI      +  +  G+R   + RELTK FE +  +  + L  +   D ++ R
Sbjct: 170 LIFYEAPHRILECLEDMEAVFGGDRPALLARELTKTFETLKGLPLAELRAFVAGDSNQQR 229

Query: 251 GE-FALVLHPVAVSGDG--GAEGERVLRLLLEELPVKTAVKLAAEISGSPRNTLYELAL 306
           GE   LV    A  G+    AE +RVL LLL ELP+K A  LAAEI+G  +N LY+LAL
Sbjct: 230 GECVVLVGGWSAPEGEQAISAEAQRVLDLLLAELPLKRAAALAAEITGVRKNLLYQLAL 288