Pairwise Alignments

Query, 315 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) from Variovorax sp. SCN45

Subject, 278 a.a., Ribosomal RNA small subunit methyltransferase I from Alteromonas macleodii MIT1002

 Score =  176 bits (446), Expect = 6e-49
 Identities = 108/280 (38%), Positives = 153/280 (54%), Gaps = 13/280 (4%)

Query: 29  TLYVVATPIGNLADITLRALHVLQLVDAIACEDTRHTQSLLRAYGIDRPGARLLAVHQHN 88
           TLY+V TPIGNL DI+ RA+ VL  V  IA EDTRH+  LL+ + I   G + L++H+HN
Sbjct: 6   TLYIVPTPIGNLDDISARAIRVLSEVSWIAAEDTRHSARLLQHFSI---GTKTLSLHEHN 62

Query: 89  EAEAAQTVVARLAQGERIAYVSDAGTPGVSDPGARLAAAVRAAGQRVLPLPGASSVTTLV 148
           E +    +  RL  GE +A +SDAGTP +SDPG  L    R  G  V  LPG  +  T +
Sbjct: 63  EDKRTAMLCERLKGGESVALISDAGTPLISDPGFVLVRKCREQGIPVSALPGPCAAITAL 122

Query: 149 GAAGLVADGGDGNASSAFVFAGFLPSKAGERDTAVQALSQEPRAVVLLEAPHRI-ESLAR 207
            A+GL  D         F+F GFLP K   R++ + AL       V  EAP RI +++  
Sbjct: 123 SASGLPTD--------KFIFEGFLPVKVQARESVLSALIDRTFTTVYYEAPRRILDTVTD 174

Query: 208 ALATLGERRITVGRELTKQFEEIATVAASALPDWFGADRDRTRGEFALVLHPVAVSGDG- 266
               LG+R+I V +EL+K FE   + +A  + D+  AD    +GEF +++ P  VS    
Sbjct: 175 IQRVLGDRQIVVAKELSKTFETYVSGSAQDVIDYLNADVAHQKGEFVVMIGPAKVSDQAI 234

Query: 267 GAEGERVLRLLLEELPVKTAVKLAAEISGSPRNTLYELAL 306
            +E   +L +L E +P+K A  + A      +N LY+  L
Sbjct: 235 PSEAMSLLSVLCEHMPLKKAAAVVATHYDLKKNALYQAGL 274