Pairwise Alignments

Query, 298 a.a., no description from Variovorax sp. SCN45

Subject, 294 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

 Score = 72.8 bits (177), Expect = 9e-18
 Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 24/288 (8%)

Query: 5   RTNLDALQSFAVFADTLNFSEAARLLHISQPALHAKVRKLAEQLDTKLYMRVGGALELTS 64
           RT+L  L+ F   A+ L+F  AA  L++SQP L   +++L  QL T+L++R   ++ LT 
Sbjct: 6   RTDLKLLRYFLAVAEELHFGRAAARLNMSQPPLSIHIKELENQLGTQLFIRHSRSVVLTH 65

Query: 65  VGEQVARHARELLTLNQRFVKGLAEGRDQPVATLAAGEGAYLYL--LGKALSQFSGP--- 119
            G+ +   +R LL +N   V    E        +  GE   + L  +G A+     P   
Sbjct: 66  AGKILMEESRRLL-VNANNVLARIE-------QIGRGEAGRIELGVVGTAMWGRMRPVMR 117

Query: 120 ---GASPHLQLLTRNRDEAIQAVRAGQAQL--GIAPLGT-VPADLTAVRLTVVGQVLVVP 173
                +P++ +L R +  A+Q     + +L  GI  + T  P   T++RL     ++ +P
Sbjct: 118 RFLRENPNVDVLFREKMPAMQMALLERRELDAGIWRMATEPPTGFTSLRLHESAFLVAMP 177

Query: 174 RTHALASRKSVRLRDLKDAQLIVPPAGRPHRELLGRLLQAESVPWQPSLEANGWELMLRF 233
             H L+S  +V L  L+D   +  P      + L R+ Q          E N  + +L  
Sbjct: 178 EEHHLSSFSTVPLEALRDEYFVTMPPVYTDWDFLQRVCQQVGFSPVVIREVNEPQTVLAM 237

Query: 234 AQLGFGLAVV---NACCRIPKGLVAIPL-QGYPALEYHVFHTADRPPA 277
             +G G+ ++    A    P G++  PL Q  PA  Y V+ T    PA
Sbjct: 238 VSMGIGITLIADSYAQMNWP-GVIFRPLKQRIPADLYIVYETQQVTPA 284