Pairwise Alignments

Query, 255 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 265 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  113 bits (283), Expect = 3e-30
 Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 10/236 (4%)

Query: 23  YPPGTMLHTHSHRRAQFLYGATGVMEVGTDDGAWVVPPQRGVWIPAGKPHRVRMLGVST- 81
           Y  G +   H H + Q L+   GVM V T    WV+PPQR +WIP  + H   +L  +  
Sbjct: 24  YTRGEVDPPHRHPQGQLLFAIKGVMLVETGSKRWVIPPQRALWIPPFQEHTYSVLSATEL 83

Query: 82  RSLYIEPRDVPRKG-----DQCEVLNVSPLLRQLLMEAIEAPAEYDRQGRDGVLMRLVLH 136
           R+++  P  + + G     ++  V+  + L ++L+     A      Q    VL+  +L 
Sbjct: 84  RAVWFSPALISQCGSFKRKEEVHVITATALFKELIAGLFSAQYRPASQRSMAVLLLEILS 143

Query: 137 EVARADALPLLHVPLPRDPALAGLCVEFLRRPDIHAAPSTWAGQLNVSERTFNRRFSLET 196
           E  +  A     +P+P D  L  +  + +       +    A Q+ +SERTF+R F  +T
Sbjct: 144 EAQQISA----ELPMPVDERLHRVACDIIANNLWDVSMERLAEQVAMSERTFSRAFIKDT 199

Query: 197 GMAFGKWRQRACVLVALSRLAAGEPVTVVALDMGYDSPGAFSTMFRKTLGRPPSHF 252
           G +F  WRQRA +  +L  LA G PV  VA  +G+    AF+  FR  +G  P+ F
Sbjct: 200 GFSFRAWRQRARICASLDLLANGYPVKQVAWMLGFSGQAAFAAAFRAVVGATPADF 255