Pairwise Alignments

Query, 475 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

 Score =  354 bits (908), Expect = e-102
 Identities = 206/470 (43%), Positives = 286/470 (60%), Gaps = 6/470 (1%)

Query: 1   MTKKLIPTALAAAMLLAGCSLIPTYERPAAPVPTTFPGDPAQPAGQAAANLAWQDFFTDP 60
           M  +++P  LA  + LAGCSL PTY+RP APV   + GD A   G +   L WQ F  DP
Sbjct: 4   MVNRVLPIVLA--LTLAGCSLTPTYQRPEAPVAAEW-GDAAGHTGHSVEQLDWQAFIVDP 60

Query: 61  RLAGLIQTALANNRDLRVSVLNIEQARAQFQIQRSALFPALGVTGTGSRSGPNPYQGIEP 120
            L  L+ TAL NNR LR ++L+IEQARAQ++IQR+   P L  + +G+R    P      
Sbjct: 61  VLRQLVGTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHL-PAALSSD 119

Query: 121 GMGSVASQYSVNFGFTAWELDFFGRIRALKDQALAQYLATDETRKAVQISLIASVANGWL 180
           G   V+S Y V      +E+D FGR+++L D AL QYLAT+E  +A +I+LIA V+  +L
Sbjct: 120 GREGVSSTYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYL 179

Query: 181 TLLADDELLEITRQTMVTREESVRLTKLRFDNGVSSELDYQAANGQFESARAAYAQQLRA 240
            L   +    +TRQT+ +RE+S+ L   R   G ++ LD+Q A G  E +RA     +R 
Sbjct: 180 ALDGAERRQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQ 239

Query: 241 RAEDENALALLLGAPVPAEATAGGAKGLNGIKPMPDVPAGLPSDLLAERPDIRSAEQQLI 300
           + +  NAL LLLG+   A+A    A+  +    + D+  G PS L+  RPDI +AE +L 
Sbjct: 240 QRQAYNALVLLLGSAEAAKAMP--AERPDEPMVLNDIVPGAPSALIERRPDILAAEHRLR 297

Query: 301 AANANIGAARANFFPRVSLTSSIGTASTEFSGLFDRGSKAWSFAPTVTLPIFNAGSNRAT 360
           A NA+IGAARA FFPR+SLT S GTAS + SGLFD GS++W+F P ++LP+F+AG NRA 
Sbjct: 298 ARNADIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAG 357

Query: 361 LESAKAGREIAVAQYEKSIQTAFREVADALAGRATLGEQVRALRAQADSEAVRFKLSDLR 420
           L  A+A ++ AVA YE +IQ AFREVADALA   TL  +  A RA AD+      L+  R
Sbjct: 358 LSLAEARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKAR 417

Query: 421 YRNGIASALDLLDAQRSLFAAQQSAVTTQLLQLQNQVTLYKTLGGGWATR 470
           Y  G+ + L  LDAQR+ +  + + +     +    V L++ LGGGW ++
Sbjct: 418 YEGGVDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGWPSK 467