Pairwise Alignments

Query, 475 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  417 bits (1071), Expect = e-121
 Identities = 232/477 (48%), Positives = 311/477 (65%), Gaps = 11/477 (2%)

Query: 1   MTKKLIPTALAAAMLLAGCSLIPTYERPAAPVPTTFPGDPA----QPAGQAAANLAWQDF 56
           MTK L+  A+ A  +L GCSLIP Y+ P APV   +P  PA    Q A  AAA   W+ F
Sbjct: 1   MTKSLLSLAVTA-FILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQF 59

Query: 57  FTDPRLAGLIQTALANNRDLRVSVLNIEQARAQFQIQRSALFPALGVTGTGSRSGPNPYQ 116
           F DP L  LIQT+L NNRDLRV+ LN++  RAQ++IQR+ LFPA+  TG+GSR    P  
Sbjct: 60  FHDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRV-PAN 118

Query: 117 GIEPGMGSVASQYSVNFGFTAWELDFFGRIRALKDQALAQYLATDETRKAVQISLIASVA 176
             + G   + SQYS   G +A+ELD FGR+R+L +QAL  YL++++ R++ QI+L+ASVA
Sbjct: 119 MSQTGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVA 178

Query: 177 NGWLTLLADDELLEITRQTMVTREESVRLTKLRFDNGVSSELDYQAANGQFESARAAYAQ 236
           N + T  AD  L ++T +T+ T EES  LT+   + GV+S LD   A    E AR  Y+Q
Sbjct: 179 NAYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQ 238

Query: 237 QLRARAEDENALALLLGAPVPAEATAGGAKGLN-GIKPMPDVPAGLPSDLLAERPDIRSA 295
             R  A+D N+L +LLG  +PA+     AK L      + +VPAGLPSD+L  RPDI+ A
Sbjct: 239 YQRLVAQDVNSLTVLLGTGIPADL----AKPLELDADQLAEVPAGLPSDILQRRPDIQEA 294

Query: 296 EQQLIAANANIGAARANFFPRVSLTSSIGTASTEFSGLFDRGSKAWSFAPTVTLPIFNAG 355
           E  L AANANIGAARA FFP +SLT++ G+ S +   LF  G   W F P + LPIFNAG
Sbjct: 295 EHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAG 354

Query: 356 SNRATLESAKAGREIAVAQYEKSIQTAFREVADALAGRATLGEQVRALRAQADSEAVRFK 415
           S +A+L+ +K  ++I VA+YEK+IQTAF+EV+D LA R T  EQ++A R    +    ++
Sbjct: 355 SLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYR 414

Query: 416 LSDLRYRNGIASALDLLDAQRSLFAAQQSAVTTQLLQLQNQVTLYKTLGGGWATRDG 472
           L++ RYR GI S L  LDAQR+LF+AQQ+ +  +L QL ++V LYK LGGGW  + G
Sbjct: 415 LAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGWYEQTG 471