Pairwise Alignments

Query, 373 a.a., ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

Subject, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 17/282 (6%)

Query: 82  AVLFQAAPMILVGLAGAIAFRARFWNLGLEGQMIWGAIGATAVSMWQIGPENLRLPLMFV 141
           AVL  A P+IL  L   +  RA   NLG+EG M+ GA        W        L +   
Sbjct: 16  AVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTG-----WLAVYAGAPLWVGVG 70

Query: 142 AAVGCGLLWVLGPAWLKLKLGVNEIISTLMLNYMA---ANFLLHLVYGSWKDPKDNFPYS 198
            A   G+++ L  A+L + L +++ +S L +  +A   + F   + +     P    P++
Sbjct: 71  VAALTGMVFGLLHAFLTVGLALSQHVSGLGITLLATALSYFGYRVSFPKVNTPPTITPFA 130

Query: 199 PQFRAFERLPEIGAGVGSSILLAGVVALLAWWLVSVSRAGLYLRFVDANPRVAHANGVPV 258
           P    +  +P + A    ++    +V ++ W L      GL LR    NP+ A + GV V
Sbjct: 131 PM--DWLPVPILNAQTALTLFALLLVPVVGWVLYRTP-LGLALRMAGENPQAAESQGVSV 187

Query: 259 RRTIYGAVLLSGAMAGLAGFAVAAGQEGRLTQAFYQGYGFSGILIAFLARNNPLAATVVA 318
             T  GA++   A+ G+AG  +              G G+  + +   A   P  A + A
Sbjct: 188 AATRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVFASWRPGKALLGA 247

Query: 319 LLVAALFVTGRSLQ------VFYQVPFSMVQLIQAIIVVCVA 354
           LL A        LQ      + YQ+   +  L+  + +V VA
Sbjct: 248 LLFAFFDALQLRLQQSGDAVLPYQLYLMLPYLLSILALVLVA 289