Pairwise Alignments

Query, 373 a.a., ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) from Variovorax sp. SCN45

Subject, 363 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  166 bits (421), Expect = 7e-46
 Identities = 114/352 (32%), Positives = 179/352 (50%), Gaps = 4/352 (1%)

Query: 22  RYALEIRQHMAWRWQALILAAALLVGFAISAAILVMAGVPADELANEFVTQTFLDGQNFR 81
           R  LE R  ++  +  L    AL++   + A +  M G    +    F  +  L+  +  
Sbjct: 2   RIELEKRAGVSRLFTLLSPLLALVLTLLVGAVMFAMLGKNPLDALYAFFVEPLLEVWSLH 61

Query: 82  AVLFQAAPMILVGLAGAIAFRARFWNLGLEGQMIWGAI-GATAVSMWQIGPENLRLPLMF 140
            +  +AAP+IL+G+  +I +R+  WN+G EGQ   GAI G+    ++      L LPLM 
Sbjct: 62  ELAIKAAPLILIGVGLSICYRSNNWNIGAEGQFTIGAITGSILPVLYPDWHSPLILPLMM 121

Query: 141 VAAVGCGLLWVLGPAWLKLKLGVNEIISTLMLNYMAANFLLHLVYGSWKDPKD-NFPYSP 199
           V     G L+   PA LK K   NEI+ +LML Y+A  FL  L  G W+DP   NFP + 
Sbjct: 122 VMGAIGGALYAGIPALLKTKFNTNEILVSLMLVYVAQLFLDWLTRGIWRDPGGYNFPQTK 181

Query: 200 QFRAFERLPEIGAGVGS--SILLAGVVALLAWWLVSVSRAGLYLRFVDANPRVAHANGVP 257
            F     LPE+ A   +    + A V A+  W+++     G  +  +  + R     G  
Sbjct: 182 PFNDSAVLPEMLASGRAHWGFVFAIVAAIALWFMMRYMLKGFEVTVLGQSARAGRFAGFS 241

Query: 258 VRRTIYGAVLLSGAMAGLAGFAVAAGQEGRLTQAFYQGYGFSGILIAFLARNNPLAATVV 317
             R ++ ++LLSGA+AGLAG + A+G  G L  +   GYGF+ I++AFL R NPL   + 
Sbjct: 242 SSRMVWFSLLLSGALAGLAGISEASGSIGHLQPSISPGYGFTAIIVAFLGRLNPLGIILS 301

Query: 318 ALLVAALFVTGRSLQVFYQVPFSMVQLIQAIIVVCVASSDFFIRHRLRRVGA 369
            L++A  ++ G + Q+   V   + ++ Q +++  V S D  I +R+R V A
Sbjct: 302 GLVLALTYLGGEAAQLSIGVSDKVTRVFQGLMLFFVLSCDTLIFYRIRVVFA 353