Pairwise Alignments

Query, 253 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase (EC 2.1.1.166) from Variovorax sp. SCN45

Subject, 216 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score =  177 bits (449), Expect = 2e-49
 Identities = 91/209 (43%), Positives = 128/209 (61%), Gaps = 8/209 (3%)

Query: 40  KVNKAWLHDHINDPYVKLATKEGYRARAAYKLKEIDESLGLVKPGQLVVDLGSTPGAWSQ 99
           K +  WL +H NDPYVK A K+GYR+RA+YKL E+ +   L +PG  V+DLG+ PG WSQ
Sbjct: 5   KTSLKWLQEHFNDPYVKKAQKDGYRSRASYKLLELQDKDKLFRPGMSVIDLGAAPGGWSQ 64

Query: 100 YLRRRMSPDGAAAGELNGTIIALDILPMEPIEGVTFLQGDFREDALLQQLLGVLAGRKAD 159
              R +   G         +IA DIL M+ I  VTF+ GDF +DA+L ++L  +   + D
Sbjct: 65  VASRLIGGQGR--------LIASDILEMDSIPDVTFVHGDFTQDAVLAEILEAVGNSQVD 116

Query: 160 LVVSDMAPNLSGIHSADAARVAHLIELAIDFAQHHLKPEGALVAKLFHGSGYDDLVKLFK 219
           LV+SDMAPN+SG+ + D  R   L ELA+D A   L+P G  + K+F G G+D+  K  +
Sbjct: 117 LVISDMAPNMSGLPAVDMPRAMFLCELALDLAGRVLRPGGDFLVKVFQGEGFDEYHKNIR 176

Query: 220 ANFRIVKPFKPKASRDKSSETFLVGVGLK 248
             F  V+  KP +SRD+S E +L+  G +
Sbjct: 177 KLFDKVQMRKPDSSRDRSREQYLLARGFR 205