Pairwise Alignments

Query, 918 a.a., ATP-dependent, 3'-5' DNA helicase with strand annealing activity from Variovorax sp. SCN45

Subject, 826 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score = 1079 bits (2790), Expect = 0.0
 Identities = 544/824 (66%), Positives = 652/824 (79%), Gaps = 20/824 (2%)

Query: 59  WFAERGWKPFKFQRDVWKAIAQGRSGLLHATTGAGKTYAVWLGALQAFSLPRKE-TARPA 117
           WFA +GWKPF FQ++VW A+  G+SGLLHA+TGAGKTYA+W  AL  F++ R   TA+  
Sbjct: 11  WFAAKGWKPFAFQKEVWAAVKSGQSGLLHASTGAGKTYALWFAALNRFAIARPPVTAKRK 70

Query: 118 PP--PLTVLWLTPMRALAADTLRALQQPLEALGAEVHPWSTGARSGDTSSAERSAQNQRL 175
           PP  PLTVLW+TPMRALAADT RAL+ PLEAL     PWS G R+GDTSS+ER+ Q +R 
Sbjct: 71  PPAEPLTVLWITPMRALAADTARALEAPLEALQI---PWSVGLRTGDTSSSERARQTRRQ 127

Query: 176 PSVLVTTPESLSLLLARADANEVLGSVRLAVVDEWHELLGNKRGVQVQLALARLRRWNPG 235
           P+VLVTTPESL+L+LARAD+   L  +R+ VVDEWHEL+GNKRGVQ+QLALARLRRW+P 
Sbjct: 128 PTVLVTTPESLTLMLARADSEVSLAHLRMVVVDEWHELIGNKRGVQLQLALARLRRWHPD 187

Query: 236 MTVWGMSATLGNLKEAMHALLGHEEGVLVQGQVPKKLVIDSLLPGRAERFPWGGHLGLTM 295
           + VWG+SATLGN   A+  L+   +G+ VQGQ  K+L+ID+LLP   ERFPW GH+GL M
Sbjct: 188 LMVWGISATLGNQAHALEVLVPQGDGINVQGQTAKQLIIDTLLPPVTERFPWAGHIGLKM 247

Query: 296 LPQVIEEIAASKTTLVFTNTRSQSEIWYQALLEARPEWAGSIALHHGSLDREVREWVELG 355
           LPQV+ E+ AS + LVFTNTR+QSEIW+QALL+ARP+WAG IALHHGSL RE R+WVE  
Sbjct: 248 LPQVVAEVDASSSCLVFTNTRAQSEIWFQALLDARPDWAGVIALHHGSLSRETRDWVERA 307

Query: 356 LKSGELKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRITLVP 415
           LK G+LKAVVCTSSLDLGVDFLPVERVLQIGS KGVARL+QRAGRSGHAPGRPSR+TLVP
Sbjct: 308 LKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRPSRVTLVP 367

Query: 416 THSIEMVEGAAARAAIAEGHIEARHSPDQPLDVLVQHLVTVALGGGFLPDDLYAEVRGTA 475
           THS+E+VE AAA+ AIA+  IEAR SP +PLDVLVQHLV++ALGGG+ PDDL  EVRG  
Sbjct: 368 THSLELVEAAAAQDAIAQRRIEARESPYKPLDVLVQHLVSMALGGGYKPDDLLVEVRGAW 427

Query: 476 AYENLSRESWQWCLDFVSQGGPSLSAYPDYRRAVPDAEGVWRVPDARLARRHRMNIGTIV 535
           AY +L+ E W W L FV  GG SL+AYPDYRR  PD  G+WRVPDARLARRHRM++GTIV
Sbjct: 428 AYHDLTDEDWAWALGFVRHGGLSLTAYPDYRRVEPDEHGIWRVPDARLARRHRMSVGTIV 487

Query: 536 SDASMSVQF----VGGAKIGSVEESFVARMKPGDCFLFGGRLLELVRIHDMTAWVRRASG 591
           SDAS+ ++F     GG  +GSVEE F+AR+KPGD FLF GRLLELVR+ +MTA+VRR++ 
Sbjct: 488 SDASIHLKFWSKGGGGKNLGSVEEGFIARLKPGDGFLFAGRLLELVRVENMTAYVRRSNA 547

Query: 592 KRPAVPRWNGGRMPLSNTLADAVVRQLALAGDGAYDSPELQCVRPLLEIQQQWSALPTPH 651
           K+ AVPRWNGGRMPLSN LA AVV +   A  G ++ PE+Q VRPLL+ Q +WS LPT  
Sbjct: 548 KKAAVPRWNGGRMPLSNELAQAVVERFDAAAQGHFEGPEMQAVRPLLQTQVRWSGLPTRE 607

Query: 652 TLLAETLATREGSHLFLYPFAGRHVHLGLASLLAWRVAQHEARTFSIAVNDYGFELLSAT 711
            LLAE L +REG HLFLYPFAGR VHLGLASLLAWRV+Q +A TFSIAVNDYG ELLSAT
Sbjct: 608 HLLAEALKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQGQAVTFSIAVNDYGLELLSAT 667

Query: 712 EVDWPALLPQVLRLPEGNGEAGGADAALLHEVLASLNAGELAQRRFREIARVSGLVFQGY 771
           EV+WPALL + L  PE           LL +V+ASLNAGELA RRFREIAR++GLVF GY
Sbjct: 668 EVNWPALLNEALLSPE----------HLLEDVVASLNAGELALRRFREIARIAGLVFAGY 717

Query: 772 PGEKRSSRQLQASSSLFWEVFRKYDPDNRLLQQAEQELLAQELEIGRLRASLVRMAGQQL 831
           PG  +S+RQ+QASS LF+EVF++YDP N LL QA +E+L  EL+I RL  +L  +   +L
Sbjct: 718 PGAPKSTRQVQASSGLFFEVFKQYDPQNLLLTQAGEEVLRDELDIRRLEQTLRHLCALKL 777

Query: 832 VLKPLARPTPFSFPLMVELFREKLSNESVADRIARMVEQLEKAA 875
            L  + RPTP +FPL+VE  RE +S+E +++RIARMV+ LEK A
Sbjct: 778 ELHRIQRPTPLAFPLLVERMRESMSSEKLSERIARMVKDLEKVA 821