Pairwise Alignments

Query, 918 a.a., ATP-dependent, 3'-5' DNA helicase with strand annealing activity from Variovorax sp. SCN45

Subject, 803 a.a., ATP-dependent helicase, DEAD/DEAH box family, associated with Flp pilus assembly from Sphingobium sp. HT1-2

 Score =  466 bits (1198), Expect = e-135
 Identities = 303/820 (36%), Positives = 439/820 (53%), Gaps = 37/820 (4%)

Query: 56  LDAWFAERGWKPFKFQRDVWKAIAQGRSGLLHATTGAGKTYAVWLGALQAFSLPRKETAR 115
           L  WFA RGW+  + Q D+  A  +G   LL A TGAGKT A +L  L            
Sbjct: 9   LTDWFASRGWRVRRHQSDMLLAAQRGEHALLVAPTGAGKTLAGFLPTLADL------IGN 62

Query: 116 PAPPPLTVLWLTPMRALAADTLRALQQPLEALGAEVHPWSTGARSGDTSSAERSAQNQRL 175
           PA   L  L+++P++ALA D  R L  P+E +G    P     R+GDT S  ++ Q  R 
Sbjct: 63  PADG-LHTLYVSPLKALAVDVRRNLLTPIEEMGL---PIRVETRTGDTPSDRKARQRVRP 118

Query: 176 PSVLVTTPESLSLLLARADANEVLGSVRLAVVDEWHELLGNKRGVQVQLALARLRRWNPG 235
           P +L+TTPESLSLLL+  DA  +   +R  +VDE H     KRG  + L++ARL+  NP 
Sbjct: 119 PHILLTTPESLSLLLSYPDAALLFEHLRTVIVDEVHAFATQKRGDLLNLSMARLQAINPD 178

Query: 236 MTVWGMSATLGNLKEAMHALLGHEEGV----LVQGQVPKKLVIDSLLPGRAERFPWGGHL 291
           +    +SAT+ ++ +A  A L  +  +     V G+   +  +  L+P    R PW GH 
Sbjct: 179 LRRVALSATVADV-DAYRAWLAPDGDIDAVTPVLGEAGAEPDVTILIP--EGRVPWSGHS 235

Query: 292 GLTMLPQVIEEIAASKTTLVFTNTRSQSEIWYQALLEARPEWAGSIALHHGSLDREVREW 351
           G     QV+ EIAA +TTLVF NTR  +E+ +Q L          IA+HHGSL  E R  
Sbjct: 236 GKYAASQVMAEIAARQTTLVFCNTRGLAELIFQELWSVNDANL-PIAIHHGSLSIEARRK 294

Query: 352 VELGLKSGELKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRI 411
           VE  + +G+L+A+V T+SLDLGVD+  V+ V+Q+G+PKG +RLLQR GR+ H     S  
Sbjct: 295 VETAMAAGKLRALVATASLDLGVDWGNVDCVIQMGAPKGSSRLLQRIGRANHRLDMASEA 354

Query: 412 TLVPTHSIEMVEGAAARAAIAEGHIEARHSPDQPLDVLVQHLVTVALGGGFLPDDLYAEV 471
            L+P +  E +E  AA  A+  G  +A       LDVL QH++ +A  G F  ++L AEV
Sbjct: 355 ILIPGNRFEYLEARAALDAVEAGERDADDFRPGALDVLAQHVMAIACAGPFREEELLAEV 414

Query: 472 RGTAAYENLSRESWQWCLDFVSQGGPSLSAYPDYRRAVPDAEGVWRVPDARLARRHRMNI 531
           R    Y  L+ E +   L F+  GG +L AY  ++R V +A+G WRV   +  ++HRMN 
Sbjct: 415 RSATPYSALTDEGFAHVLHFIEGGGYALRAYDRFKRLVREADGTWRVSHPKFIQQHRMNA 474

Query: 532 GTIVSDASMSVQFVGGAKIGSVEESFVARMKPGDCFLFGGRLLELVRIHDMTAWVRRASG 591
           G IV   +++V+F  G K+G+VEE F A ++PGD F F G  LE+VR+ D +  V RA+ 
Sbjct: 475 GIIVDQPALAVRFANGRKLGTVEEGFAATLRPGDSFFFSGMALEVVRM-DTSDLVVRATA 533

Query: 592 KRPAVPRWNGGRMPLSNTLADAVVRQLALAGDGAYDSPELQCVRPLLEIQQQWSALPTPH 651
           K   +P W G RM +S  LAD  VR      D  +  P+   VR  LE+Q+  SALP P 
Sbjct: 534 KSARIPSWGGTRMAMSTRLADR-VRHFLAEPDAWHRFPD--DVREWLEVQRTRSALPQPG 590

Query: 652 TLLAETLATREGSHLFLYPFAGRHVHLGLASLLAWRVAQHEARTFSIAVNDYGFELLSAT 711
            LL ET       ++  Y F G + H  L  LL  R+            NDY   +    
Sbjct: 591 QLLVETFPHEGRHYMVCYSFEGWNAHQSLGMLLTRRMDAQGLMPLGFVSNDYALAVYGLK 650

Query: 712 EVDWPALLPQVLRLPEGNGEAGGADAALLHEVLASLNAGELAQRRFREIARVSGLVFQGY 771
            V  P  L               AD  L HE +  +    L +R FR++A +SGL+ + +
Sbjct: 651 PVTDPQSL-------------FSAD-ILDHEFVDWVEQSSLLKRAFRDVAVISGLIERQH 696

Query: 772 PGEKRSSRQLQASSSLFWEVFRKYDPDNRLLQQAEQELLAQELEIGRLRASLVRMAGQQL 831
           PG++++ RQ+  S+ L ++V RKY PD+ LL+ A  +  A+  ++GRL   L+  A   +
Sbjct: 697 PGKRKTGRQVTFSTDLIYDVLRKYQPDHLLLKAAWADARARMTDVGRL-GDLIDRAASTM 755

Query: 832 VLKPLARPTPFSFPLMVELFREKLSNESVADRIARMVEQL 871
           +  PL R +P + PL++ + RE+++  +  D +    E L
Sbjct: 756 LHVPLDRVSPLAVPLLILIGREQVAQRNAEDALLIEAEAL 795