Pairwise Alignments

Query, 918 a.a., ATP-dependent, 3'-5' DNA helicase with strand annealing activity from Variovorax sp. SCN45

Subject, 792 a.a., large atp-dependant helicase-related protein from Agrobacterium fabrum C58

 Score =  417 bits (1072), Expect = e-120
 Identities = 280/807 (34%), Positives = 425/807 (52%), Gaps = 42/807 (5%)

Query: 85  LLHATTGAGKTYAVWLGALQAFSLPRKETARPAPPPLTVLWLTPMRALAADTLRALQQPL 144
           LL A TGAGKT   ++ +L   +   K         +  L+++P++ALA D  R L +P+
Sbjct: 2   LLIAPTGAGKTLGGFMASLTDLAERGKVPPGSGFVGVHTLYISPLKALAVDIERNLTRPV 61

Query: 145 EALGAEVHPWSTGARSGDTSSAERSAQNQRLPSVLVTTPESLSLLLARADANEVLGSVRL 204
             +G    P     R+GDT  A+R  Q  + P +L+TTPE +SLLLA  +A      ++ 
Sbjct: 62  SEMGL---PIVIETRTGDTPQAKRQRQKVKPPDILLTTPEQVSLLLANKEAERFFRDLKY 118

Query: 205 AVVDEWHELLGNKRGVQVQLALARLRRWNPGMTVWGMSATLGNLKEAMHALLGHEEGVLV 264
            V+DE H L+ +KRG  + LALAR+RR  P +   G+SAT+    +    L         
Sbjct: 119 VVLDELHSLVTSKRGHLLSLALARVRRHAPDVRFIGLSATVAEPMDLRRYLAPQG----- 173

Query: 265 QGQVPKKLVI-------DSLLPGRAERFPWGGHLGLTMLPQVIEEIAASKTTLVFTNTRS 317
           QG+ P  L+        D  +    ER PW GH        + E +   +TTLVF NTRS
Sbjct: 174 QGEPPAGLITVEGGAKPDISILHTEERIPWSGHSARYAGKDLYEALKQHQTTLVFVNTRS 233

Query: 318 QSEIWYQALLEARPEWAGSIALHHGSLDREVREWVELGLKSGELKAVVCTSSLDLGVDFL 377
           Q+E  +Q L     +    IALHHGSLD   R  VE  +   +L+AVV TS+LDLG+D+ 
Sbjct: 234 QAERVFQELWTVNDDNL-PIALHHGSLDAGQRRRVEAAMAENKLRAVVATSTLDLGIDWG 292

Query: 378 PVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRITLVPTHSIEMVEGAAARAAIAEGHIE 437
            V+ V+ +G+PKG +RL QR GRS H    PS+  LVP +  E++E    RAA+   +I 
Sbjct: 293 DVDLVVHVGAPKGASRLAQRIGRSNHRMDEPSKAILVPANRFEVME---CRAALDANYIG 349

Query: 438 ARHSP---DQPLDVLVQHLVTVALGGGFLPDDLYAEVRGTAAYENLSRESWQWCLDFVSQ 494
           A+ +P   +  LDVL QH++ +A    F  D+LY EV   + Y NL R ++   +DF + 
Sbjct: 350 AQDTPPIAEGALDVLAQHVLGMACAEPFDADELYREVTSASPYANLPRATFDRVVDFTAT 409

Query: 495 GGPSLSAYPDYRRAVPDAEGVWRVPDARLARRHRMNIGTIVSDASMSVQFV--------- 545
           GG +L  Y  Y R     +G WRV +  +A+++R+N+GTIV  A ++V+ V         
Sbjct: 410 GGYALRTYERYARIRQMKDGRWRVSNPAVAQQYRLNLGTIVEAAELNVRMVKRNAKGTVG 469

Query: 546 -GGAKIGSVEESFVARMKPGDCFLFGGRLLELVRIHDMTAWVRRASGKRPAVPRWNGGRM 604
            GG  +G VEE F+ ++  GD FLF G++L    I +    V +A    P +P + GG+ 
Sbjct: 470 RGGMSLGKVEEYFLEQLVQGDTFLFAGKVLRFEGIRENECLVSQAFSMDPKIPSYAGGKF 529

Query: 605 PLSNTLADAVVRQLALAGDGAYDSPELQCVRPLLEIQQQWSALPTPHTLLAETLATREGS 664
           PLS  LAD V   LA   D A        VR  LEIQ++ S +P    LL ET   R+  
Sbjct: 530 PLSTYLADQVRSMLA---DPARWQALPDQVRDWLEIQKEKSIIPKRDELLVETFPFRKRF 586

Query: 665 HLFLYPFAGRHVHLGLASLLAWRVAQHEARTFSIAVNDYGFELLSATEVDWPALLPQVLR 724
            + +YPF GR  H  L  LL  R+ +  A+       DY   + +  ++    L  + L 
Sbjct: 587 FMVMYPFEGRLAHQTLGMLLTRRLERAGAKPMGFVATDYSLAIWAMEDIGM-RLKSRRLS 645

Query: 725 LPEGNGEAGGADAALLHEVLASLNAGELAQRRFREIARVSGLVFQGYPGEKRSSRQLQAS 784
           L +   E    D     ++ A L+   + +R FR  A +SGL+ + +PG++++ RQ+  S
Sbjct: 646 LADLLDEDMLGD-----DLEAWLDESFMLKRTFRNCAVISGLIERRHPGKEKTGRQVTVS 700

Query: 785 SSLFWEVFRKYDPDNRLLQQAEQELLAQELEIGRLRASLVRMAGQQLVLKPLARPTPFSF 844
           + L ++V R ++PD+ LL+   ++  A  L+IGRL   L R+ G     + L   +P + 
Sbjct: 701 ADLIYDVLRSHEPDHILLEATRRDAAAGLLDIGRLGDMLKRIKG-HTTHRALEHVSPLAV 759

Query: 845 PLMVELFREKLSNESVADRIARMVEQL 871
           P+M+E+ RE ++ E++ D +A   ++L
Sbjct: 760 PVMLEIGRETVAGEAMDDVLAEAADEL 786