Pairwise Alignments

Query, 551 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Variovorax sp. SCN45

Subject, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

 Score = 58.2 bits (139), Expect = 1e-12
 Identities = 101/368 (27%), Positives = 144/368 (39%), Gaps = 50/368 (13%)

Query: 190 ADDYRALIA-PESGMEQVQKTSGQPYPFFLAHPFNLPLDQFDAVLG------PPSDWIVE 242
           ADDY  + A P S +     + G+P     A    LP +QF   L       P  DW  E
Sbjct: 169 ADDYDIVQAQPNSVLSDA--SVGKPKTRAKARKTALP-EQFTPQLATLVDRAPEGDWQYE 225

Query: 243 WKWDGIRAQLVKRAGVAWVWSRGEELVTERFP-ELAALGEALPDGTVLDGEIAVWRDGKV 301
            K+DG R     +AG   +++R     TE  P ++ AL       + LDGE+       +
Sbjct: 226 IKFDGYRMLARIQAGEVRLFTRNGHDWTECLPRQVKALQALKLKDSWLDGEVVSLNGDGL 285

Query: 302 QPFAELQKRIGRKTLGAKLLRDIPVVLLAYDLLEWEGQDLRALPQSRRRVLLDELVARMR 361
             F  LQ           + R + +V   +D     G+D R  P   RR  L E +A  R
Sbjct: 286 PDFQALQNAF-------DIGRSLDIVYYLFDAPFLNGEDRRQAPVEERRAALKEALAGSR 338

Query: 362 HPSLLPSPMLEGADWTDLATQREAARTMGVEGMMLKRRDAQYGVGRTKDVGVWWKWKIDP 421
              L  S     A   D+    E+A  + +EG++ KR  + Y   R+ D   W K K   
Sbjct: 339 STLLRYSEAFT-AHHRDIF---ESACDLALEGVIGKRLGSPYVSRRSAD---WIKLKC-R 390

Query: 422 LSIDAVLIYAQRGHGRRASLFSDYTFAVWDSPPGQEDRKLVPFAKAYSGLTDAEMARVDA 481
           LS + V++   R  G R+  F     AV        D  LV   +  +G   A +  + A
Sbjct: 391 LSQEFVIVGYTRPQGSRSG-FGALLLAV------NNDTGLVYAGRVGTGFDQAALKAIYA 443

Query: 482 IIRKTTVESFGPVKS-----------VKPTLVFELGFEGIARSTRHKSGIAVRFPRMLRW 530
            +     E+    K            VKPTLV ++ F   A  TR      VR    +  
Sbjct: 444 QLTPLECETSPLAKPLSSAQARGVHWVKPTLVAQVQF---AEWTRED---VVRQAAFVGL 497

Query: 531 REDKPVEE 538
           R DKPV +
Sbjct: 498 RTDKPVAQ 505