Pairwise Alignments

Query, 466 a.a., ATP synthase beta chain (EC 3.6.3.14) from Variovorax sp. SCN45

Subject, 473 a.a., flagellum-specific ATP synthase from Agrobacterium fabrum C58

 Score =  148 bits (373), Expect = 4e-40
 Identities = 117/355 (32%), Positives = 175/355 (49%), Gaps = 24/355 (6%)

Query: 84  GRIMDVLGSPIDERGPVGQELTA-SIHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGG 142
           GR ++ LG PID +GP+   +   SI   AP        +   +TG++ ID+  P   G 
Sbjct: 122 GRTINALGEPIDGQGPLASGIVRRSISNNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQ 181

Query: 143 KVGLFGGAGVGKTVNMMELINNIAKAHS-GLSVFAGVGERTREGNDFYHEMADSGVVNLE 201
           ++G+F G+GVGK+     L++ +AKA +    V A VGER RE  +F  +     +    
Sbjct: 182 RLGIFAGSGVGKST----LLSMLAKADAFDKVVIALVGERGREVREFIEDTMGDNM---- 233

Query: 202 KLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVS 261
               SK   V    +E P  R    L+ +TIAE FRD+G +VL  +D++ R+  A  EV+
Sbjct: 234 ----SKSVAVVATSDESPMLRKMAPLSAVTIAEHFRDQGDNVLLIIDSVTRFAHAIREVA 289

Query: 262 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFA 319
              G  P A GY  ++  E+ RL ER    +   G+IT+I ++ V  D+  DP   +T  
Sbjct: 290 VASGEPPVARGYPASVFTELPRLLERAGPGAEGTGTITAIVSILVDGDNHNDPIADSTRG 349

Query: 320 HLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEEHYNVARAVQGTLQRYKELRDI 379
            LD  +VL R +A  G YP ++PL S SR        ++   V+R ++  + R++E RD+
Sbjct: 350 ILDGHIVLDRSLAEEGRYPPINPLASISRLAKKAWTPDQEKLVSR-LKALVHRFEETRDL 408

Query: 380 IAILG-MDELAPDDKLAVARARKIQRFLSQ-PFHVAEVFTGAPGKYVPLAETIRG 432
             I G      PD  +AV +   I   L Q P   A     A   Y  LA  +RG
Sbjct: 409 RLIGGYRPGTDPDLDMAVKQVPIIYETLKQLPDEPA-----AQDAYADLATALRG 458