Pairwise Alignments

Query, 537 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Variovorax sp. SCN45

Subject, 444 a.a., Flagellum-specific ATP synthase from Alteromonas macleodii MIT1002

 Score =  139 bits (350), Expect = 2e-37
 Identities = 99/376 (26%), Positives = 173/376 (46%), Gaps = 18/376 (4%)

Query: 87  ISEGDTVKCTGRILEVPVGPELIGRVVNALGQPIDGKGPINAKMTDVIEKVAPGVIARKS 146
           I  G  V    R   +PVG  L+GRVV+  GQP+DG G INA+      +     + R+ 
Sbjct: 80  IVPGSRVMPLNRQSGLPVGMGLLGRVVDGNGQPLDGLGEINAEARAPTTRPPMNPLIRRP 139

Query: 147 VDQPMQTGLKSVDSMVPVGRGQRELIIGDRQTGKTAVAIDAIINQKGQNMTCVYVAIGQK 206
           ++ PM  G+++++++  VG GQR  +      GK+ +    ++ +  +    V   +G++
Sbjct: 140 INTPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLL--GMMTRGCEADVVVVGLVGER 197

Query: 207 ASSIKNVVRALEQAGAMDYTIVVAASASESAAMQYVSAYSGCTMGEYFRDRGQDALIVYD 266
              +K  +  +         +VVAA A  S  M+     +  T+ EYFRD+G   L++ D
Sbjct: 198 GREVKEFIHEILTEEERQRAVVVAAPADTSPLMRLKGCETAVTIAEYFRDKGMKVLLLID 257

Query: 267 DLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADYVEAFTKGEVKGKT 326
            L++ A+A R+++L +  PP  + YP  VF     L+ERA             G    + 
Sbjct: 258 SLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERA-------------GNGSERQ 304

Query: 327 GSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLFNAGIRPAINAGISVSRVGS-- 384
           GS+TA   + T+  D+   +     +I DG + L   L ++G  PAI+   S+SRV    
Sbjct: 305 GSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMPMV 364

Query: 385 -SAQTNLVKNQSGGIRTDLAQYRELAAFAQFASDLDEATRKQLDRGARVTELLKQTQYNP 443
            S +  L+  +   + ++  Q ++L +   +A   D      +     +  LL+Q     
Sbjct: 365 VSEEHQLMARRIRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINALLQQGVKQV 424

Query: 444 LPISLMSATLFAVNKG 459
           +P       + A+ KG
Sbjct: 425 IPYDESLEGMAALAKG 440