Pairwise Alignments

Query, 247 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

Subject, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 1e-44
 Identities = 97/228 (42%), Positives = 130/228 (57%), Gaps = 9/228 (3%)

Query: 21  ILLIDDDEHLAAPLTTYFARFGCTLESAVRPSEGLAKLRAGQYDAAILDVMLPEMDGFEL 80
           IL++DDD+ +   L TY +R G  + +          L     D  ILDVMLP+ DGF L
Sbjct: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETTPCDLVILDVMLPDEDGFSL 67

Query: 81  CREIR---KESDIPIVMLTARGEVMDRVVGLELGADDYVPKPFEPRELVARVQTILRRQR 137
           CR +R   +++ +PI+MLTA  +  DRV+GLELGADDY+ KPF PREL AR++ +LRR  
Sbjct: 68  CRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRTE 127

Query: 138 SAPPAASSAQHRVFDGLSID-LDRRQVLRQGERVELTGTEFELLALLAGEPGKVFSRDDI 196
               A  +A    FD   +D +  R   R GE V L+G +F LL L    P ++  RD I
Sbjct: 128 FGQTAPGNAV-LAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILDRDTI 186

Query: 197 LNRLRGHEAELYTRAVDIVVSRLRKKLEPLD----CIKTLRNAGYALA 240
            N  RG E     R VD+ VSRLR++L   D     I+T+R +GY LA
Sbjct: 187 GNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLA 234