Pairwise Alignments

Query, 423 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  159 bits (401), Expect = 2e-43
 Identities = 114/353 (32%), Positives = 175/353 (49%), Gaps = 18/353 (5%)

Query: 52  EKVKEKAKAQGLWNLFLPVD-SASASGYSGAGLTNQEYAPLAEIMGAVPWASEAFNCSAP 110
           E + E A+  GL+ + +P     S +GY    +  +E A        +     +  C   
Sbjct: 38  EAIDEMAEL-GLFGMLVPEQWGGSDTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVP- 95

Query: 111 DTGNMETIARYGSEEIKARWLKPLLEGQIRSAFAMTEPDVASSDATNISTRIERQGDEYV 170
                  I R+G+E+ K ++L PL  G +  AFA+TEP  A SDA+++ TR   +GD YV
Sbjct: 96  -------ILRFGNEQQKEQFLTPLATGAMLGAFALTEPQ-AGSDASSLKTRARLEGDHYV 147

Query: 171 INGHKWWISGAADPRCAVFITMGKSDPEAPRHSQQSMVVVPADAKGIRIVRPLNVMGYDD 230
           +NG K +I+   +    V I    +DPEA +    S  +VP D+ G ++ R  + +G   
Sbjct: 148 LNGSKQFITSGQN--AGVVIVFAVTDPEAGKRGI-SAFIVPTDSPGYQVARVEDKLGQHA 204

Query: 231 APHGHVEMYFENVRVPVGNILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALELMCKR 290
           +     ++ F+NV+VPV N L  EG G++IA   L  GRI    + +G+A  A E+    
Sbjct: 205 SDT--CQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRIGIASQAVGMARAAFEVARDY 262

Query: 291 ASSRVAFGKTVASQTVTQERIAEARCKIDMARLLTLKAAWLMDVAGNKVAKNEIAMIKVV 350
           A+ R +FGK +        R+A+   KI +AR + L AA L D    + A  E +M K+ 
Sbjct: 263 ANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAALRD--AGRPALVEASMAKLF 320

Query: 351 APSMACQVIDWAMQVHGGGGMCDDFPLAYAYAGARTLRFADGPDEVHRNAIAK 403
           A  MA +V   A+Q  GG G   DFPL   Y   R  +  +G  ++ R  IA+
Sbjct: 321 ASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYEGTSDIQRMVIAR 373