Pairwise Alignments

Query, 303 a.a., SSU ribosomal protein S3p (S3e) from Variovorax sp. SCN45

Subject, 237 a.a., 30S ribosomal subunit protein S3 from Pseudomonas putida KT2440

 Score =  306 bits (783), Expect = 4e-88
 Identities = 147/230 (63%), Positives = 183/230 (79%), Gaps = 10/230 (4%)

Query: 1   MGQKIHPTGFRLAVTRNWSSRWYASDRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERP 60
           MGQK+HPTG RL + +  +S WYA    +A  L +D+K REYL+ KLK+ASVSR+ I RP
Sbjct: 10  MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRP 69

Query: 61  AKNARITIYSARPGVVIGKKGEDIENLKRELGKQLGVPVAVNIEEVRKPEIDAQLIADSI 120
           A+ ARITI++ARPG+VIGKKGED+E L+++L KQ+GVPV +NIEE+RKPE+DA L+A S+
Sbjct: 70  AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 129

Query: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
            QQLE+R+MFRRAMKRA+QNAMR+GA GIKI  +GRL G EIARTEWYREGRVPLHTLRA
Sbjct: 130 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 189

Query: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRNDLPAVETPRPEEERRPRGP 230
           DIDY T EA TTYGVIGVKVW++KG+ +G            +EE +P+ P
Sbjct: 190 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGR----------QEELKPQAP 229