Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Variovorax sp. SCN45

Subject, 317 a.a., D-alanyl-D-alanine endopeptidase from Dickeya dianthicola ME23

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 33/290 (11%)

Query: 5   LGALRALVITAAASISFIAAAQVPAPPEIAAR------SYLLLDVTANQILAQKDIDSPV 58
           L  +  L+++A    +  AAA+ PA   +AAR      S +++D+  N++L   + D  V
Sbjct: 7   LSVVSLLLLSAPVWFTPQAAAKTPATQHVAARQEIASGSAMVVDLRNNEVLYSANPDVVV 66

Query: 59  EPASLTKLMTAYVVFDALRTKKISLTQTLPVSQRAWKMPGSRMFIDPKMQVPVEDLIKGL 118
             AS+TKLMTA VV DA   + +    ++ +SQ   +M G    +    ++   D++   
Sbjct: 67  PIASVTKLMTAMVVLDA--NQPLDEHISVDISQTK-EMNGVYSRVRLGSEISRHDMLLLA 123

Query: 119 IVQSGNDATVALAEGVGGTVEHFVEMMNAQAKVLGMKNTTYKNPEGLTTPGHTTTARDLS 178
           ++ S N A  +LA    G  + F+  MNA+A+ LGM +T Y  P GL+T  + +TARDL+
Sbjct: 124 LMSSENRAAASLAHHYRGGYQAFIAAMNAKARALGMTHTRYVEPTGLST-SNVSTARDLT 182

Query: 179 ILATRLVRDFP---------EEAKYYAIKKYRYPGTPSTNDTNRNMLLFR-DPTVDGLKT 228
            L     + +P         E+   +    Y  P        N N L++R D  +   KT
Sbjct: 183 KLLI-ASKQYPLLSQLSTSHEKTAVFTQPSYSLP------FRNTNHLIYRQDWNIQLTKT 235

Query: 229 GHTDAAGYCMIATAKRDFPNLTGGRRLLSIVLGATSETVRANESQKLLNW 278
           G T+ AG+C++         +  GR +  +VL A  +     ++ +L NW
Sbjct: 236 GFTNQAGHCLV------MRTVINGRPVSLVVLDAFGKFTHFADANRLRNW 279